Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

46 transcription factors

CTCF 1 dataset

Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF460KDD 393 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 659 bp overlap

ChIP DE DE-FOXA2-2 639 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 56 bp overlap

ChIP DE DE-GATA4-1 533 bp overlap

ChIP DE DE-GATA4-2 723 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 671 bp overlap

ChIP DE DE-GATA6-2 780 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 643 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 710 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 635 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 580 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 556 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 267 bp overlap

Gmeb1 1 dataset

Motif DE_12h DE_12h-Gmeb1_MA0615.2 6 bp overlap

JUN 4 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 272 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 783 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 309 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 570 bp overlap

KLF1 1 dataset

Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap

KLF10 1 dataset

Motif DE_24h DE_24h-KLF10_MA1511.2 9 bp overlap

KLF14 1 dataset

Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap

KLF16 1 dataset

Motif DE_24h DE_24h-KLF16_MA0741.1 11 bp overlap

KLF2 1 dataset

Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap

KLF4 1 dataset

Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap

KLF5 1 dataset

Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap

MEIS1 2 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 401 bp overlap

NR2C1 1 dataset

Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap

NR2C2 3 datasets

Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap

Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap

Motif DE_24h DE_24h-NR2C2_MA0504.2 14 bp overlap

NR2F1 4 datasets

Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap

Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap

Motif DE_24h DE_24h-NR2F1_MA0017.3 12 bp overlap

Nr1H2 1 dataset

Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap

Nr2F6 2 datasets

Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap

Motif DE_24h DE_24h-Nr2F6_MA0728.1 15 bp overlap

Nr2f6 1 dataset

Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap

PATZ1 1 dataset

Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap

PBX3 1 dataset

Motif DE_24h DE_24h-PBX3_MA1114.2 11 bp overlap

PKNOX2 1 dataset

Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 394 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 390 bp overlap

Pparg::Rxra 1 dataset

Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap

RXRA::VDR 1 dataset

Motif DE_12h DE_12h-RXRAVDR_MA0074.1 15 bp overlap

Rarg 2 datasets

Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap

Motif DE_24h DE_24h-Rarg_MA0859.2 15 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 283 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 567 bp overlap

SMAD2_3 2 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 599 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 535 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 174 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 496 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 793 bp overlap

TGIF1 1 dataset

Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap

TGIF2 1 dataset

Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap

THRB 1 dataset

Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap

Wt1 1 dataset

Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap

ZIC4 1 dataset

Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap

ZIC5 1 dataset

Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap

ZNF667 1 dataset

Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap

ZNF707 1 dataset

Motif DE_24h DE_24h-ZNF707_MA1715.1 15 bp overlap

ZNF816 1 dataset

Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap

Genome Browser