chr9 : 1,052,464 1,052,615
151 bp 23 TFs 3 linked genes
This 151 bp open chromatin element is linked to DMRT2, LINC01230, and ENSG00000286684 and is bound by 23 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
DMRT2 2.1 kb Proximal Proximity
LINC01230 6.8 kb Proximal Proximity
ENSG00000286684 9.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:1,047,464 – 1,057,615
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 151 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 151 bp overlap
BRD4 1 dataset
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 151 bp overlap
CTCF 16 datasets
ChIP RWPE1 ENCFF200GQF 134 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 151 bp overlap
ChIP brain ENCFF685VRG 151 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 97 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 104 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 87 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 62 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF562MJV 69 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 96 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 97 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF896AZK 63 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 151 bp overlap
ChIP lower lobe of right lung ENCFF092XHT 60 bp overlap
ChIP nephron ENCFF589HXU 75 bp overlap
ChIP neural crest cell ENCFF182LWK 73 bp overlap
ChIP pancreas ENCFF372XNU 64 bp overlap
E2F1 1 dataset
ChIP MCF-7 ENCFF692OYJ 151 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 151 bp overlap
EZH2 9 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 151 bp overlap
ChIP GM23338 ENCFF613YON 151 bp overlap
ChIP H1 ENCFF232NZA 71 bp overlap
ChIP H1 ENCFF232NZA 151 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 151 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 103 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 150 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 151 bp overlap
ChIP keratinocyte ENCFF070STK 151 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF753XDO 105 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 151 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 143 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 82 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 151 bp overlap
NRF1 10 datasets
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 143 bp overlap
ChIP K-562 ENCSR494TDU.NRF1.K-562 151 bp overlap
ChIP K-562 ENCSR998AJK.NRF1.K-562 151 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 133 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 132 bp overlap
ChIP K-562_Ab_R157-1-3H3 GSE97661.NRF1.K-562_Ab_R157-1-3H3 123 bp overlap
ChIP K562 ENCFF130SGK 151 bp overlap
ChIP K562 ENCFF689EWI 151 bp overlap
ChIP K562 ENCFF689EWI 151 bp overlap
ChIP K562 ENCFF791UHF 151 bp overlap
PKNOX1 2 datasets
ChIP GM12878 ENCFF589FCY 151 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 151 bp overlap
POLR2A 1 dataset
ChIP SK-N-MC ENCFF088IVG 151 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 151 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 151 bp overlap
RELB 3 datasets
ChIP GM12878 ENCFF217ADF 148 bp overlap
ChIP GM12878 ENCFF217ADF 151 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 74 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 151 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 76 bp overlap
ChIP H1 ENCFF881NFR 151 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 151 bp overlap