Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

41 transcription factors

ASCL1 1 dataset

Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap

BRD4 1 dataset

ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 348 bp overlap

CBFB 1 dataset

ChIP ME-1 GSE46044.CBFB.ME-1 197 bp overlap

CTCF 20 datasets

ChIP 22Rv1 ENCFF466OXN 422 bp overlap

ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 234 bp overlap

Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap

Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap

Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap

ChIP H1 ENCFF230QSV 148 bp overlap

ChIP H1 ENCFF414GZI 174 bp overlap

ChIP H9 ENCFF152GTF 174 bp overlap

ChIP LNCaP clone FGC ENCFF519YVI 164 bp overlap

ChIP LNCaP clone FGC ENCFF957KCI 142 bp overlap

ChIP MCF-7 ENCFF198DQX 201 bp overlap

ChIP MCF-7 ENCFF414SZG 167 bp overlap

ChIP MCF-7 ENCFF424NQR 165 bp overlap

ChIP MCF-7 ENCFF844STM 165 bp overlap

ChIP MCF-7 ENCFF954TUV 164 bp overlap

ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 310 bp overlap

ChIP PC-3 ENCFF487TUI 316 bp overlap

ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 223 bp overlap

ChIP WA01 ENCSR000DLK.CTCF.WA01 111 bp overlap

ChIP placenta ENCFF029PHY 288 bp overlap

CTCFL 1 dataset

Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF031ISE 132 bp overlap

ChIP BLaER1 ENCFF460KDD 167 bp overlap

E2F1 1 dataset

ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 164 bp overlap

ERG 2 datasets

ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 251 bp overlap

ChIP MCF-7 GSE23730.ERG.MCF-7 196 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

GCM1 1 dataset

Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap

HCFC1R1 1 dataset

ChIP cartilage GSE100311.HCFC1R1.cartilage 258 bp overlap

IKZF1 1 dataset

Motif ES_0h ES_0h-IKZF1_MA1508.2 8 bp overlap

KDM5B 1 dataset

ChIP T-47D GSE46055.KDM5B.T-47D 136 bp overlap

KLF13 1 dataset

Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap

NKX2-2 1 dataset

Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap

NKX2-5 1 dataset

Motif DE_12h DE_12h-NKX2-5_MA0063.3 7 bp overlap

NR2F2 2 datasets

ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 404 bp overlap

ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 490 bp overlap

OGG1 1 dataset

ChIP HEK293 GSE89017.OGG1.HEK293 88 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 327 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 295 bp overlap

RAD21 2 datasets

ChIP H1 ENCFF698EWO 113 bp overlap

ChIP H1 ENCFF967OJF 187 bp overlap

RORC 2 datasets

ChIP HCC70 GSE126380.RORC.HCC70 401 bp overlap

ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 243 bp overlap

SCRT1 1 dataset

Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap

SCRT2 1 dataset

Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap

SNAI1 1 dataset

Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap

SNAI3 1 dataset

Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap

TCF12 1 dataset

Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap

TCF3 1 dataset

Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap

TCF4 1 dataset

Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap

WDR5 1 dataset

ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 449 bp overlap

YY2 1 dataset

Motif ES_0h ES_0h-YY2_MA0748.3 7 bp overlap

ZBTB48 2 datasets

ChIP U2OS GSE96776.ZBTB48.U2OS 425 bp overlap

ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 95 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZFP14 1 dataset

Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap

ZNF135 1 dataset

Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap

ZNF354C 1 dataset

Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap

Zfp335 2 datasets

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap

Zfp961 1 dataset

Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap

Zic1::Zic2 1 dataset

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap

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