Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

44 transcription factors

ARNT 1 dataset

ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 248 bp overlap

ARNTL 2 datasets

ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 257 bp overlap

ChIP U2OS_trough_DMSO GSE85096.ARNTL.U2OS_trough_DMSO 228 bp overlap

Crx 2 datasets

Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap

Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap

DUX4 2 datasets

Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

Dmbx1 2 datasets

Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap

Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 190 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 428 bp overlap

ChIP DE DE-FOXA2-2 373 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 300 bp overlap

ChIP DE DE-GATA4-2 376 bp overlap

GATA5 2 datasets

Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 343 bp overlap

ChIP DE DE-GATA6-2 391 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 323 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 351 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 333 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 303 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 425 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 366 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 365 bp overlap

GSC 2 datasets

Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap

Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap

GSC2 2 datasets

Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap

Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap

Hnf1A 2 datasets

Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap

Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap

IRF3 2 datasets

Motif DE_36h DE_36h-IRF3_MA1418.2 17 bp overlap

Motif DE_60h DE_60h-IRF3_MA1418.2 17 bp overlap

MXI1 1 dataset

Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap

NEUROG2 1 dataset

ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 103 bp overlap

NR4A1 1 dataset

Motif DE_60h DE_60h-NR4A1_MA1112.3 8 bp overlap

NR4A2 1 dataset

Motif DE_60h DE_60h-NR4A2_MA0160.3 8 bp overlap

OTX1 2 datasets

Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap

Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap

OTX2 2 datasets

Motif DE_36h DE_36h-OTX2_MA0712.3 7 bp overlap

Motif DE_60h DE_60h-OTX2_MA0712.3 7 bp overlap

OVOL1 2 datasets

Motif DE_36h DE_36h-OVOL1_MA1544.2 10 bp overlap

Motif DE_60h DE_60h-OVOL1_MA1544.2 10 bp overlap

PITX1 2 datasets

Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap

Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap

PITX2 2 datasets

Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap

Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap

PITX3 2 datasets

Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap

Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap

PRDM1 2 datasets

Motif DE_36h DE_36h-PRDM1_MA0508.4 7 bp overlap

Motif DE_60h DE_60h-PRDM1_MA0508.4 7 bp overlap

Pparg::Rxra 1 dataset

Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap

Prdm14 1 dataset

Motif DE_60h DE_60h-Prdm14_MA1998.2 8 bp overlap

RHOXF1 2 datasets

Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap

Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap

Rarb 2 datasets

Motif DE_36h DE_36h-Rarb_MA0858.1 17 bp overlap

Motif DE_60h DE_60h-Rarb_MA0858.1 17 bp overlap

Rarg 1 dataset

Motif DE_60h DE_60h-Rarg_MA0860.1 17 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 434 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 341 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 247 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 259 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 267 bp overlap

SRF 1 dataset

Motif DE_60h DE_60h-SRF_MA0083.3 16 bp overlap

TCF7L1 2 datasets

Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap

Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap

TERF1 1 dataset

ChIP LCL GSE55053.TERF1.LCL 248 bp overlap

THRA 1 dataset

Motif DE_60h DE_60h-THRA_MA1969.2 18 bp overlap

THRB 1 dataset

Motif DE_60h DE_60h-THRB_MA1576.2 18 bp overlap

ZFX 1 dataset

ChIP MCF-7 GSE102616.ZFX.MCF-7 201 bp overlap

ZNF205 1 dataset

ChIP HEK293T GSE78099.ZNF205.HEK293T 202 bp overlap

ZNF257 1 dataset

Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap

ZNF26 1 dataset

ChIP HEK293T GSE78099.ZNF26.HEK293T 195 bp overlap

ZNF534 1 dataset

ChIP HEK293T GSE78099.ZNF534.HEK293T 198 bp overlap

ZNF677 2 datasets

Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap

Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap

Genome Browser