chr8 : 54,463,309 54,463,781
472 bp 18 TFs 2 linked genes
This 472 bp open chromatin element is linked to ENSG00000274310 and SOX17 and is bound by 18 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000274310 3.4 kb Proximal Proximity
SOX17 5.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:54,458,309 – 54,468,781
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 325 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 61 bp overlap
ERG 1 dataset
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 115 bp overlap
EZH2 12 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 465 bp overlap
ChIP GM23338 ENCFF613YON 218 bp overlap
ChIP H1 ENCFF232NZA 472 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 208 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 308 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 278 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 213 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 437 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 234 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 456 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 301 bp overlap
ChIP neural progenitor cell ENCFF472NFV 472 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 64 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-2 167 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 80 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 155 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 144 bp overlap
JARID2 4 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 371 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 130 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 203 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 472 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4-T910M 107 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 377 bp overlap
NCAPH2 1 dataset
ChIP RMG-I GSE120058.NCAPH2.RMG-I 411 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 92 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 472 bp overlap
ChIP H1 ENCFF239FFS 58 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 257 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 243 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 466 bp overlap
SMARCC1 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 72 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 290 bp overlap
SPI1 1 dataset
ChIP U-937 GSE128834.SPI1.U-937 53 bp overlap
SUZ12 2 datasets
ChIP H1 ENCFF881NFR 472 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 472 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 113 bp overlap