Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

42 transcription factors

DUX4 2 datasets

Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap

Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap

DUXA 2 datasets

Motif DE_12h DE_12h-DUXA_MA0884.2 13 bp overlap

Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 335 bp overlap

ChIP DE DE-FOXA2-2 233 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 455 bp overlap

ChIP DE DE-GATA4-2 422 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-1 368 bp overlap

ChIP DE DE-GATA6-2 465 bp overlap

Motif DE_12h DE_12h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 312 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 461 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 384 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 380 bp overlap

Gata3 1 dataset

Motif DE_12h DE_12h-Gata3_MA0037.5 8 bp overlap

HMBOX1 2 datasets

Motif DE_12h DE_12h-HMBOX1_MA0895.2 7 bp overlap

Motif DE_48h DE_48h-HMBOX1_MA0895.2 7 bp overlap

HOXB4 1 dataset

Motif DE_48h DE_48h-HOXB4_MA1499.2 6 bp overlap

HOXC4 1 dataset

Motif DE_48h DE_48h-HOXC4_MA1504.2 6 bp overlap

HOXD3 1 dataset

Motif DE_48h DE_48h-HOXD3_MA0912.2 8 bp overlap

HOXD4 1 dataset

Motif DE_48h DE_48h-HOXD4_MA1507.2 6 bp overlap

Hnf1A 1 dataset

Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap

Irf1 1 dataset

Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 345 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 297 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 330 bp overlap

MEIS1 2 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

Mecom 1 dataset

Motif DE_12h DE_12h-Mecom_MA0029.2 11 bp overlap

Msgn1 2 datasets

Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap

Motif DE_48h DE_48h-Msgn1_MA1524.3 10 bp overlap

NANOG 5 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 275 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 393 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 300 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 283 bp overlap

ChIP hESC GSE18292.NANOG.hESC 98 bp overlap

NR6A1 1 dataset

Motif DE_12h DE_12h-NR6A1_MA1541.2 14 bp overlap

PHOX2A 2 datasets

Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap

Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap

PHOX2B 2 datasets

Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap

Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap

POU6F1 1 dataset

Motif DE_48h DE_48h-POU6F1_MA1549.2 7 bp overlap

POU6F2 2 datasets

Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap

Motif DE_48h DE_48h-POU6F2_MA0793.2 9 bp overlap

PROP1 2 datasets

Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap

Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap

Prdm14 2 datasets

Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap

Motif DE_48h DE_48h-Prdm14_MA1998.2 8 bp overlap

Prdm15 1 dataset

Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 487 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 505 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 482 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 482 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 505 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 493 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 455 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 460 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 260 bp overlap

SOX15 2 datasets

Motif DE_12h DE_12h-SOX15_MA1152.2 7 bp overlap

Motif DE_48h DE_48h-SOX15_MA1152.2 7 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 251 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 339 bp overlap

SP5 2 datasets

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap

Sox6 2 datasets

Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap

Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap

Stat2 1 dataset

Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap

Stat6 2 datasets

Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap

Motif DE_48h DE_48h-Stat6_MA0520.2 10 bp overlap

TCF7L1 1 dataset

Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap

TCF7L2 1 dataset

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

TRPS1 1 dataset

Motif DE_12h DE_12h-TRPS1_MA1970.2 8 bp overlap

ZNF354A 1 dataset

Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap

ZNF677 2 datasets

Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap

Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap

ZNF8 2 datasets

Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap

Motif DE_48h DE_48h-ZNF8_MA1718.1 20 bp overlap

Genome Browser