chr7 : 148,344,881 148,345,250
369 bp 23 TFs 1 linked gene
This 369 bp open chromatin element is linked to CNTNAP2 and is bound by 23 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CNTNAP2 5.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:148,339,881 – 148,350,250
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_Bag-1L_KO_Veh GSE89938.AR.LNCaP_Bag-1L_KO_Veh 184 bp overlap
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 156 bp overlap
BRD4 2 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 232 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 169 bp overlap
CEBPB 1 dataset
ChIP K562 ENCFF584CTB 98 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 135 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 243 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 184 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 196 bp overlap
ChIP DE DE-FOXA2-2 205 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 308 bp overlap
ChIP foregut GSE117136.GATA4.foregut 297 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 74 bp overlap
ChIP DE DE-GATA6-2 268 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 297 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 369 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 336 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 369 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 369 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 288 bp overlap
ChIP foregut GSE117136.GATA6.foregut 275 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 262 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 143 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 148 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 173 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 156 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 341 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 369 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 93 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 149 bp overlap