chr7 : 128,715,815 128,716,108
293 bp 24 TFs 1 linked gene
This 293 bp open chromatin element is linked to GARIN1B and is bound by 24 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GARIN1B 6.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:128,710,815 – 128,721,108
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 181 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF274GAT 196 bp overlap
ChIP BLaER1 ENCFF335XTP 293 bp overlap
ChIP BLaER1 ENCFF680YXW 231 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2-640min-ERalpha GSE94023.ESR1.MCF-7_E2-640min-ERalpha 226 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 99 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 88 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 141 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 293 bp overlap
ChIP DE DE-FOXA2-2 285 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-1 230 bp overlap
ISL1 1 dataset
ChIP Huh-7 GSE77957.ISL1.Huh-7 74 bp overlap
MED1 2 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 131 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 232 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 259 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 101 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 269 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 293 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 111 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 153 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 293 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 234 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 247 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 293 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 293 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 243 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 175 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 293 bp overlap
TEAD4 1 dataset
ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 124 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 293 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 87 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 85 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 117 bp overlap