chr7 : 52,213,778 52,214,334
556 bp 47 TFs 0 linked genes
This 556 bp open chromatin element has no linked target genes and is bound by 47 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:52,208,778 – 52,219,334
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
DUX4 2 datasets
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Dux 2 datasets
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 242 bp overlap
ETV7 1 dataset
Motif DE_60h DE_60h-ETV7_MA1708.2 9 bp overlap
FOXA1 1 dataset
Motif DE_60h DE_60h-FOXA1_MA0148.5 8 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 206 bp overlap
ChIP DE DE-FOXA2-1 512 bp overlap
ChIP DE DE-FOXA2-2 425 bp overlap
FOXF2 1 dataset
Motif DE_60h DE_60h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_60h DE_60h-FOXG1_MA0613.1 8 bp overlap
FOXK1 1 dataset
Motif DE_60h DE_60h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_60h DE_60h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_60h DE_60h-FOXL1_MA0033.2 7 bp overlap
FOXN3 1 dataset
Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap
FOXO4 1 dataset
Motif DE_60h DE_60h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_60h DE_60h-FOXO6_MA0849.1 7 bp overlap
FOXP3 1 dataset
Motif DE_60h DE_60h-FOXP3_MA0850.1 7 bp overlap
Foxf1 1 dataset
Motif DE_60h DE_60h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_60h DE_60h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_60h DE_60h-Foxj3_MA0851.2 9 bp overlap
Foxo1 1 dataset
Motif DE_60h DE_60h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_60h DE_60h-Foxo3_MA0157.4 7 bp overlap
GATA2 3 datasets
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 252 bp overlap
GATA3 4 datasets
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 196 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 255 bp overlap
ChIP T47D-A1-2_Dex GSE112491.GATA3.T47D-A1-2_Dex 210 bp overlap
ChIP T47D-A1-2_EtOH GSE112491.GATA3.T47D-A1-2_EtOH 295 bp overlap
GATA4 8 datasets
ChIP DE DE-GATA4-1 556 bp overlap
ChIP DE DE-GATA4-2 556 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 298 bp overlap
ChIP foregut GSE117136.GATA4.foregut 524 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 556 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 357 bp overlap
GATA5 2 datasets
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 17 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 236 bp overlap
ChIP DE DE-GATA6-1 556 bp overlap
ChIP DE DE-GATA6-2 556 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 540 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 556 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 545 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 556 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 556 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 556 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 556 bp overlap
ChIP foregut GSE117136.GATA6.foregut 482 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 339 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 423 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 341 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 414 bp overlap
Gata3 2 datasets
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
LHX6 2 datasets
Motif DE_48h DE_48h-LHX6_MA0658.2 8 bp overlap
Motif DE_60h DE_60h-LHX6_MA0658.2 8 bp overlap
LIN54 1 dataset
Motif DE_60h DE_60h-LIN54_MA0619.2 7 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MYB 2 datasets
Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap
Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap
Mecom 3 datasets
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
PHOX2A 2 datasets
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
POU2F3 1 dataset
Motif DE_60h DE_60h-POU2F3_MA0627.3 9 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 147 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 556 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 394 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 401 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 533 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 556 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 204 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 325 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 453 bp overlap
SOX21 1 dataset
Motif DE_60h DE_60h-SOX21_MA0866.1 15 bp overlap
Sox11 1 dataset
Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap
TRPS1 2 datasets
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
VENTX 2 datasets
Motif DE_48h DE_48h-VENTX_MA0724.1 9 bp overlap
Motif DE_60h DE_60h-VENTX_MA0724.1 9 bp overlap
YBX1 1 dataset
ChIP HEL GSE146717.YBX1.HEL 261 bp overlap
ZNF528 1 dataset
Motif DE_48h DE_48h-ZNF528_MA1597.1 17 bp overlap
ZNF680 1 dataset
Motif DE_60h DE_60h-ZNF680_MA1729.2 11 bp overlap