chr7 : 35,263,294 35,263,692
398 bp 24 TFs 2 linked genes
This 398 bp open chromatin element is linked to ENSG00000289335 and TBX20 and is bound by 24 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000289335 8.6 kb Proximal Proximity
TBX20 9.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:35,258,294 – 35,268,692
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 258 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 226 bp overlap
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 145 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 392 bp overlap
EZH2 6 datasets
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 148 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 278 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 269 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 327 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 298 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 189 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 284 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 398 bp overlap
ChIP DE DE-GATA4-2 398 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 398 bp overlap
ChIP DE DE-GATA6-2 398 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 398 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 398 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 398 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 398 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 398 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 398 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 389 bp overlap
ChIP foregut GSE117136.GATA6.foregut 398 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 226 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 322 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 61 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 106 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 156 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 259 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 282 bp overlap
SMAD2-3 3 datasets
ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 99 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 354 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 398 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 297 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 394 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 270 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 295 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 275 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 393 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 360 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 234 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 241 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 113 bp overlap