chr6 : 115,824,534 115,825,203
669 bp 55 TFs 0 linked genes
This 669 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:115,819,534 – 115,830,203
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif DE_36h DE_36h-Arid3a_MA0151.1 6 bp overlap
BCL6 1 dataset
Motif DE_36h DE_36h-BCL6_MA0463.3 13 bp overlap
CDX1 1 dataset
Motif DE_36h DE_36h-CDX1_MA0878.3 10 bp overlap
CDX4 1 dataset
Motif DE_36h DE_36h-CDX4_MA1473.2 9 bp overlap
CTCF 1 dataset
ChIP astrocyte ENCFF558APA 199 bp overlap
DPRX 1 dataset
Motif DE_36h DE_36h-DPRX_MA1480.2 9 bp overlap
DUX4 1 dataset
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap
Dux 1 dataset
Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 178 bp overlap
ESR1 1 dataset
ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 131 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 285 bp overlap
ChIP DE DE-FOXA2-2 296 bp overlap
FOXC1 1 dataset
Motif DE_36h DE_36h-FOXC1_MA0032.2 11 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 438 bp overlap
ChIP DE DE-GATA4-2 342 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 527 bp overlap
ChIP DE DE-GATA6-2 463 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 345 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 363 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 298 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 426 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 330 bp overlap
HOXA10 1 dataset
Motif DE_36h DE_36h-HOXA10_MA0899.2 9 bp overlap
HOXB9 1 dataset
Motif DE_36h DE_36h-HOXB9_MA1503.2 9 bp overlap
HOXC10 1 dataset
Motif DE_36h DE_36h-HOXC10_MA0905.2 9 bp overlap
HOXC11 1 dataset
Motif DE_36h DE_36h-HOXC11_MA0651.3 11 bp overlap
HOXC12 1 dataset
Motif DE_36h DE_36h-HOXC12_MA0906.2 10 bp overlap
HOXC13 1 dataset
Motif DE_36h DE_36h-HOXC13_MA0907.2 9 bp overlap
HOXC9 1 dataset
Motif DE_36h DE_36h-HOXC9_MA0485.3 9 bp overlap
HOXD10 1 dataset
Motif DE_36h DE_36h-HOXD10_MA1506.2 10 bp overlap
HOXD11 1 dataset
Motif DE_36h DE_36h-HOXD11_MA0908.2 9 bp overlap
HOXD12 1 dataset
Motif DE_36h DE_36h-HOXD12_MA0873.2 10 bp overlap
HOXD9 1 dataset
Motif DE_36h DE_36h-HOXD9_MA0913.3 9 bp overlap
Hoxa11 1 dataset
Motif DE_36h DE_36h-Hoxa11_MA0911.2 9 bp overlap
Lhx3 1 dataset
Motif DE_36h DE_36h-Lhx3_MA0135.2 12 bp overlap
MEIS2 1 dataset
Motif DE_36h DE_36h-MEIS2_MA1640.2 9 bp overlap
MYB 1 dataset
Motif DE_36h DE_36h-MYB_MA0100.4 6 bp overlap
NFATC3 1 dataset
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
NR1I2 1 dataset
Motif DE_36h DE_36h-NR1I2_MA1533.2 15 bp overlap
Nfatc1 1 dataset
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
Nr2e3 1 dataset
Motif DE_36h DE_36h-Nr2e3_MA0164.2 6 bp overlap
OSR1 1 dataset
Motif DE_36h DE_36h-OSR1_MA1542.2 8 bp overlap
OSR2 1 dataset
Motif DE_36h DE_36h-OSR2_MA1646.2 8 bp overlap
PBX2 1 dataset
Motif DE_36h DE_36h-PBX2_MA1113.3 9 bp overlap
PHOX2A 1 dataset
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 77 bp overlap
PROP1 2 datasets
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 141 bp overlap
RFX7 1 dataset
Motif DE_36h DE_36h-RFX7_MA1554.2 8 bp overlap
Rfx6 1 dataset
Motif DE_36h DE_36h-Rfx6_MA1724.2 9 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 285 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 372 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 335 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 336 bp overlap
Sox1 1 dataset
Motif DE_36h DE_36h-Sox1_MA0870.1 15 bp overlap
ZBTB24 1 dataset
Motif DE_36h DE_36h-ZBTB24_MA2330.1 10 bp overlap