Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

27 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 247 bp overlap

BRD4 1 dataset

ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 214 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 247 bp overlap

CTCF 4 datasets

ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 193 bp overlap

ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 117 bp overlap

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 240 bp overlap

ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 116 bp overlap

EZH2 1 dataset

ChIP neural progenitor cell ENCFF018MKA 247 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 247 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-2 247 bp overlap

GABPA 1 dataset

ChIP MCF-7 GSE72082.GABPA.MCF-7 115 bp overlap

KLF4 1 dataset

ChIP HAP1 GSE130417.KLF4.HAP1 146 bp overlap

MAX 2 datasets

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 161 bp overlap

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 178 bp overlap

MYB 2 datasets

ChIP THP-1 GSE90769.MYB.THP-1 170 bp overlap

ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 210 bp overlap

NANOG 5 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 247 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 192 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 247 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 247 bp overlap

ChIP hESC GSE18292.NANOG.hESC 167 bp overlap

NKX2-1 1 dataset

ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 202 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap

POU5F1 2 datasets

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 247 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 149 bp overlap

RAD21 4 datasets

ChIP HAP1 GSE126634.RAD21.HAP1 247 bp overlap

ChIP HAP1 GSE152721.RAD21.HAP1 247 bp overlap

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 247 bp overlap

ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 173 bp overlap

REST 6 datasets

ChIP GM23338 ENCFF024TCL 195 bp overlap

ChIP GM23338 ENCSR871KYB.REST.GM23338 188 bp overlap

ChIP H1 ENCFF429RUE 157 bp overlap

ChIP PFSK1 ENCSR000BOX.REST.PFSK1 120 bp overlap

ChIP WA01 ENCSR000BHM.REST.WA01 159 bp overlap

ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 137 bp overlap

SMARCA4 2 datasets

ChIP NSC GSE125033.SMARCA4.NSC 247 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 247 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 204 bp overlap

SMARCC1 2 datasets

ChIP ESC S25-ESC-d0-BAF155-exp1 247 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 232 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 219 bp overlap

SOX2 4 datasets

ChIP HNSC GSE69479.SOX2.HNSC 247 bp overlap

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 247 bp overlap

ChIP hESC GSE18292.SOX2.hESC 87 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 247 bp overlap

SOX21 1 dataset

ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 247 bp overlap

SOX8 1 dataset

ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 189 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 111 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 247 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 210 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 247 bp overlap

Genome Browser