chr5 : 172,941,457 172,942,000
543 bp 22 TFs 4 linked genes
This 543 bp open chromatin element is linked to 4 target genes and is bound by 22 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
RPL26L1 17.1 kb Distal Multiome
ATP6V0E1 42.1 kb Distal Multiome
ERGIC1 107.4 kb Distal Multiome
CREBRF 114.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:172,936,457 – 172,947,000
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 472 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 184 bp overlap
ESR1 1 dataset
ChIP MCF-7 GSE35109.ESR1.MCF-7 103 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 489 bp overlap
ChIP DE DE-FOXA2-2 342 bp overlap
FOXS1 1 dataset
Motif DE_72h DE_72h-FOXS1_MA2118.1 8 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 543 bp overlap
ChIP DE DE-GATA4-2 484 bp overlap
ChIP foregut GSE117136.GATA4.foregut 440 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 451 bp overlap
ChIP DE DE-GATA6-2 521 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 255 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 267 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 259 bp overlap
ChIP foregut GSE117136.GATA6.foregut 335 bp overlap
INSM1 1 dataset
Motif DE_72h DE_72h-INSM1_MA0155.1 12 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 114 bp overlap
NFIC 3 datasets
ChIP Hep-G2 GSE108514.NFIC.Hep-G2 115 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 361 bp overlap
ChIP K562 ENCFF167YID 70 bp overlap
OSR2 1 dataset
Motif DE_72h DE_72h-OSR2_MA1646.2 8 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 220 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 54 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 391 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 277 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 253 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 496 bp overlap
ZKSCAN1 2 datasets
ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 78 bp overlap
ChIP K562 ENCFF977CBA 56 bp overlap
ZNF281 1 dataset
Motif DE_72h DE_72h-ZNF281_MA1630.3 10 bp overlap
ZNF549 1 dataset
Motif DE_72h DE_72h-ZNF549_MA1728.2 8 bp overlap