chr5 : 150,491,951 150,492,394
443 bp 25 TFs 2 linked genes
This 443 bp open chromatin element is linked to NDST1-AS1 and NDST1 and is bound by 25 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
NDST1-AS1 6.0 kb Proximal Proximity
NDST1 6.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:150,486,951 – 150,497,394
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 173 bp overlap
ChIP LPS141 GSE111253.BRD4.LPS141 72 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 65 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 88 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 149 bp overlap
EBF1 2 datasets
ChIP MUTUL GSE75503.EBF1.MUTUL 183 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 170 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 244 bp overlap
ESRRA 3 datasets
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 65 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 82 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 124 bp overlap
ETV4 1 dataset
ChIP T-47D GSE129803.ETV4.T-47D 433 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 294 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 196 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 320 bp overlap
ChIP DE DE-FOXA2-1 333 bp overlap
ChIP DE DE-FOXA2-2 267 bp overlap
GATA4 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 229 bp overlap
ChIP DE DE-GATA4-1 443 bp overlap
ChIP DE DE-GATA4-2 443 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 408 bp overlap
ChIP DE DE-GATA6-2 430 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 429 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 341 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 355 bp overlap
MED1 5 datasets
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 335 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 233 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 204 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 163 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 85 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 115 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_Bethyl275_G GSE118494.NCAPH2.IMR-90_Bethyl275_G 157 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 179 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 266 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 429 bp overlap
POLR2A 2 datasets
ChIP spleen ENCFF446ZGT 194 bp overlap
ChIP spleen ENCFF706IUS 240 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 443 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 298 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 443 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 443 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 84 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 121 bp overlap
ChIP K562 ENCFF875HLX 188 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 88 bp overlap