chr5 : 149,402,230 149,402,797
567 bp 18 TFs 5 linked genes
This 567 bp open chromatin element is linked to 5 target genes and is bound by 18 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
PCYOX1L 44.4 kb Distal Multiome
GRPEL2 57.0 kb Distal Multiome
AFAP1L1 130.6 kb Distal Multiome
CSNK1A1 149.0 kb Distal Multiome
ARHGEF37 149.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:149,397,230 – 149,407,797
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 371 bp overlap
ERG 2 datasets
ChIP VCaP GSE49091.ERG.VCaP 134 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 144 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 508 bp overlap
ChIP DE DE-FOXA2-2 567 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 542 bp overlap
ChIP DE DE-GATA4-2 567 bp overlap
ChIP foregut GSE117136.GATA4.foregut 394 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 519 bp overlap
ChIP DE DE-GATA6-2 567 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 556 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 378 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 440 bp overlap
ChIP foregut GSE117136.GATA6.foregut 355 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 97 bp overlap
L3MBTL2 1 dataset
ChIP K562 ENCFF320EQC 53 bp overlap
MYC 1 dataset
ChIP Jurkat GSE83777.MYC.Jurkat 192 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 171 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 154 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 567 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 479 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 437 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 434 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 433 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 242 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 54 bp overlap
ZNF263 4 datasets
ChIP HEK293 ENCFF336CWQ 375 bp overlap
ChIP HEK293T GSE78099.ZNF263.HEK293T 172 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 194 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 161 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 296 bp overlap