chr5 : 139,903,214 139,903,579
365 bp 22 TFs 1 linked gene
This 365 bp open chromatin element is linked to NRG2 and is bound by 22 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NRG2 730 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:139,898,214 – 139,908,579
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 107 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 61 bp overlap
CTCF 1 dataset
ChIP dorsolateral prefrontal cortex ENCFF458OBF 249 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 143 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 127 bp overlap
ESR1 1 dataset
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 78 bp overlap
EZH2 21 datasets
ChIP GM23338 ENCFF613YON 365 bp overlap
ChIP H1 ENCFF232NZA 365 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 186 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 192 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 225 bp overlap
ChIP SK-N-MC ENCFF434OHW 103 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 81 bp overlap
ChIP astrocyte ENCFF365JTP 133 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 365 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 365 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 365 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 351 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 145 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 87 bp overlap
ChIP hepatocyte ENCFF552DZB 171 bp overlap
ChIP keratinocyte ENCFF070STK 127 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 53 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 164 bp overlap
ChIP neural progenitor cell ENCFF018MKA 343 bp overlap
ChIP neural progenitor cell ENCFF018MKA 154 bp overlap
ChIP neural progenitor cell ENCFF472NFV 365 bp overlap
EZH2_phosphoT487 5 datasets
ChIP DOHH2 ENCSR562NOP.EZH2_phosphoT487.DOHH2 365 bp overlap
ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 365 bp overlap
ChIP GM23338 ENCSR591DTH.EZH2_phosphoT487.GM23338 365 bp overlap
ChIP HCT-116 ENCSR429CLV.EZH2_phosphoT487.HCT-116 365 bp overlap
ChIP OCI-Ly7 ENCSR565XSL.EZH2_phosphoT487.OCI-Ly7 365 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 247 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 145 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 365 bp overlap
ChIP DE DE-GATA4-2 323 bp overlap
ChIP foregut GSE117136.GATA4.foregut 320 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 284 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 317 bp overlap
ChIP DE DE-GATA6-2 355 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 365 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 365 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 323 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 365 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 365 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 365 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 356 bp overlap
ChIP foregut GSE117136.GATA6.foregut 320 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 169 bp overlap
JARID2 5 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 157 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 61 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 100 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 66 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 50 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 334 bp overlap
LDB1 1 dataset
ChIP H9_DOX-0 GSE137670.LDB1.H9_DOX-0 91 bp overlap
MTF2 1 dataset
ChIP DU145_CTR GSE135623.MTF2.DU145_CTR 110 bp overlap
RNF2 2 datasets
ChIP HUES-64 GSE104059.RNF2.HUES-64 215 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 365 bp overlap
SAP30 1 dataset
ChIP H1 ENCFF149IOE 78 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 365 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 231 bp overlap
SUZ12 6 datasets
ChIP H1 ENCFF881NFR 365 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 105 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 210 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 56 bp overlap
ChIP NT2/D1 ENCFF574SXS 285 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 216 bp overlap
TAL1 3 datasets
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 151 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 143 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 199 bp overlap