chr5 : 97,136,171 97,136,448
277 bp 19 TFs 1 linked gene
This 277 bp open chromatin element is linked to LIX1 and is bound by 19 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LIX1 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:97,131,171 – 97,141,448
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 134 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 246 bp overlap
BRD4 2 datasets
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 88 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 277 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 241 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 175 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 277 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-2 277 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 277 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 277 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 277 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 277 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 277 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 277 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 277 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 277 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 275 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 277 bp overlap
JUNB 1 dataset
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 220 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 277 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 277 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 123 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 138 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 277 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 103 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 87 bp overlap