Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

33 transcription factors

CTCF 1 dataset

ChIP endodermal cell ENCFF471YCZ 253 bp overlap

DUX4 2 datasets

Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap

Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap

EP300 2 datasets

ChIP neural cell ENCFF442QNK 324 bp overlap

ChIP neural cell ENCFF442QNK 182 bp overlap

HNF4A 1 dataset

Motif ES_0h ES_0h-HNF4A_MA1494.2 14 bp overlap

HOXA4 1 dataset

Motif ES_0h ES_0h-HOXA4_MA1496.2 7 bp overlap

HOXB4 1 dataset

Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap

HOXC13 2 datasets

Motif DE_12h DE_12h-HOXC13_MA0907.2 9 bp overlap

Motif ES_0h ES_0h-HOXC13_MA0907.2 9 bp overlap

HOXC4 1 dataset

Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap

HOXD12 2 datasets

Motif DE_12h DE_12h-HOXD12_MA0873.2 10 bp overlap

Motif ES_0h ES_0h-HOXD12_MA0873.2 10 bp overlap

HOXD4 1 dataset

Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap

Hmga1 2 datasets

Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap

Motif ES_0h ES_0h-Hmga1_MA2124.1 8 bp overlap

MEF2A 2 datasets

Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap

Motif ES_0h ES_0h-MEF2A_MA0052.5 10 bp overlap

MEF2B 2 datasets

Motif DE_12h DE_12h-MEF2B_MA0660.1 12 bp overlap

Motif ES_0h ES_0h-MEF2B_MA0660.1 12 bp overlap

MEF2C 2 datasets

Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap

Motif ES_0h ES_0h-MEF2C_MA0497.2 11 bp overlap

MEF2D 2 datasets

Motif DE_12h DE_12h-MEF2D_MA0773.1 12 bp overlap

Motif ES_0h ES_0h-MEF2D_MA0773.1 12 bp overlap

NANOG 8 datasets

ChIP GM23338 ENCFF065NZG 284 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 266 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 324 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 324 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 324 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 324 bp overlap

ChIP hESC GSE18292.NANOG.hESC 298 bp overlap

ChIP hESC GSE20650.NANOG.hESC 220 bp overlap

PDX1 2 datasets

ChIP hiPSC GSE125768.PDX1.hiPSC 257 bp overlap

ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap

POU5F1 6 datasets

ChIP GM23338 ENCFF333SNB 292 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 209 bp overlap

ChIP NCCIT GSE36134.POU5F1.NCCIT 320 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 324 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 250 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 150 bp overlap

POU6F1 1 dataset

Motif ES_0h ES_0h-POU6F1_MA1549.2 7 bp overlap

Prdm14 1 dataset

Motif ES_0h ES_0h-Prdm14_MA1998.2 8 bp overlap

RAD21 1 dataset

ChIP WA09 GSE105028.RAD21.WA09 169 bp overlap

RARA 1 dataset

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 79 bp overlap

SALL3 1 dataset

ChIP hiPSC GSE104863.SALL3.hiPSC 208 bp overlap

SMAD3 1 dataset

ChIP hESC GSE29422.SMAD3.hESC 175 bp overlap

SMARCA4 3 datasets

ChIP NSC GSE125033.SMARCA4.NSC 229 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 259 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 175 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 311 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 324 bp overlap

Sox17 2 datasets

Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap

Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap

Sox7 2 datasets

Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap

Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap

TEAD4 2 datasets

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap

ZNF300 1 dataset

ChIP HEK293T GSE78099.ZNF300.HEK293T 194 bp overlap

ZNF354A 2 datasets

Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap

Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap

ZNF85 2 datasets

Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap

Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap

Genome Browser