chr1 : 91,944,175 91,944,379
204 bp 24 TFs 1 linked gene
This 204 bp open chromatin element is linked to BRDT and is bound by 24 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
BRDT 7.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:91,939,175 – 91,949,379
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 125 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 132 bp overlap
CTCF 1 dataset
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 77 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 149 bp overlap
EZH1 2 datasets
ChIP ProEs GSE59087.EZH1.ProEs 144 bp overlap
ChIP ProEs_SHCTR GSE59087.EZH1.ProEs_SHCTR 150 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 204 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 204 bp overlap
GATA4 2 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 129 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 197 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 204 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 204 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 204 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 204 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 204 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 204 bp overlap
JUN 8 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 204 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 204 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 204 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 204 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 204 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 204 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 204 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 204 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 172 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 79 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 204 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 154 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 127 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 204 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 204 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 169 bp overlap
ChIP hESC GSE18292.NANOG.hESC 78 bp overlap
POU5F1 6 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 204 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 109 bp overlap
ChIP OSvKM GSE81899.POU5F1.OSvKM 204 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 89 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 204 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 204 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 204 bp overlap
SMAD2-3 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 204 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 204 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 204 bp overlap
ChIP KGN_TGF GSE138496.SMAD2-3.KGN_TGF 132 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 160 bp overlap
SMAD4 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 157 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.SMAD4.HGrC1_C134W-TGF_parental 101 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 204 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 129 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 189 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 204 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 204 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 99 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 81 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 134 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 77 bp overlap
ZNF770 2 datasets
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 137 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 88 bp overlap