Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

43 transcription factors

CDX2 1 dataset

Motif DE_48h DE_48h-CDX2_MA0465.3 8 bp overlap

CEBPA 2 datasets

Motif DE_48h DE_48h-CEBPA_MA0102.5 10 bp overlap

Motif DE_60h DE_60h-CEBPA_MA0102.5 10 bp overlap

CEBPG 2 datasets

Motif DE_48h DE_48h-CEBPG_MA1636.2 10 bp overlap

Motif DE_60h DE_60h-CEBPG_MA1636.2 10 bp overlap

CTCF 2 datasets

Motif DE_48h DE_48h-CTCF_MA1929.2 31 bp overlap

Motif DE_60h DE_60h-CTCF_MA1929.2 31 bp overlap

Crx 1 dataset

Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 309 bp overlap

ETV5::FOXI1 2 datasets

Motif DE_48h DE_48h-ETV5FOXI1_MA1946.2 12 bp overlap

Motif DE_60h DE_60h-ETV5FOXI1_MA1946.2 12 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 364 bp overlap

FOXD3 1 dataset

Motif DE_48h DE_48h-FOXD3_MA0041.3 14 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 456 bp overlap

ChIP DE DE-GATA4-2 456 bp overlap

ChIP foregut GSE117136.GATA4.foregut 435 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 417 bp overlap

ChIP DE DE-GATA6-2 456 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 420 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 421 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 389 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 433 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 425 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 419 bp overlap

ChIP foregut GSE117136.GATA6.foregut 338 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 305 bp overlap

GSC 1 dataset

Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap

MEF2B 1 dataset

Motif DE_48h DE_48h-MEF2B_MA0660.1 12 bp overlap

MGA::EVX1 1 dataset

Motif DE_48h DE_48h-MGAEVX1_MA1960.2 11 bp overlap

Mecom 2 datasets

Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap

Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap

NANOG 1 dataset

ChIP hESC GSE18292.NANOG.hESC 96 bp overlap

OTX1 1 dataset

Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap

PBX1 2 datasets

Motif DE_48h DE_48h-PBX1_MA0070.2 9 bp overlap

Motif DE_60h DE_60h-PBX1_MA0070.2 9 bp overlap

PITX1 1 dataset

Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap

PITX3 1 dataset

Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap

RHOXF1 1 dataset

Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 354 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 283 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 236 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 273 bp overlap

SPIB 2 datasets

Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap

Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap

Sox17 2 datasets

Motif DE_48h DE_48h-Sox17_MA0078.3 10 bp overlap

Motif DE_60h DE_60h-Sox17_MA0078.3 10 bp overlap

Sox7 2 datasets

Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap

Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap

Spi1 2 datasets

Motif DE_48h DE_48h-Spi1_MA0080.7 13 bp overlap

Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap

Stat4 1 dataset

Motif DE_48h DE_48h-Stat4_MA0518.2 10 bp overlap

Stat5b 2 datasets

Motif DE_48h DE_48h-Stat5b_MA1625.2 9 bp overlap

Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap

TCF7L1 2 datasets

Motif DE_48h DE_48h-TCF7L1_MA1421.1 12 bp overlap

Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap

ZNF35 1 dataset

Motif DE_48h DE_48h-ZNF35_MA2333.1 7 bp overlap

ZNF354A 2 datasets

Motif DE_48h DE_48h-ZNF354A_MA1978.2 20 bp overlap

Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap

ZNF354C 1 dataset

Motif DE_48h DE_48h-ZNF354C_MA0130.1 6 bp overlap

ZNF416 2 datasets

Motif DE_48h DE_48h-ZNF416_MA1979.2 10 bp overlap

Motif DE_60h DE_60h-ZNF416_MA1979.2 10 bp overlap

ZNF547 3 datasets

Motif DE_48h DE_48h-ZNF547_MA2334.1 13 bp overlap

Motif DE_60h DE_60h-ZNF547_MA2334.1 13 bp overlap

ZNF684 1 dataset

Motif DE_48h DE_48h-ZNF684_MA1600.2 14 bp overlap

ZNF76 1 dataset

Motif DE_48h DE_48h-ZNF76_MA1716.2 17 bp overlap

Zfp809 2 datasets

Motif DE_48h DE_48h-Zfp809_MA2125.1 9 bp overlap

Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap

Zic1::Zic2 2 datasets

Motif DE_48h DE_48h-Zic1Zic2_MA1628.2 7 bp overlap

Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap

Zic3 2 datasets

Motif DE_48h DE_48h-Zic3_MA0697.3 7 bp overlap

Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap

Genome Browser