chr5 : 44,387,561 44,387,706
145 bp 22 TFs 2 linked genes
This 145 bp open chromatin element is linked to FGF10-AS1 and FGF10 and is bound by 22 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
FGF10-AS1 1.0 kb Proximal Proximity
FGF10 1.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:44,382,561 – 44,392,706
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
EZH2 5 datasets
ChIP PC-9 ENCSR793USK.EZH2.PC-9 145 bp overlap
ChIP T-REx-293_K27WT_12h GSE118954.EZH2.T-REx-293_K27WT_12h 145 bp overlap
ChIP T-REx-293_K27WT_6h GSE118954.EZH2.T-REx-293_K27WT_6h 145 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 58 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 145 bp overlap
FOXA1 37 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 145 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 145 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 142 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 112 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 71 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 134 bp overlap
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 145 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 79 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 145 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 145 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 145 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 109 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 88 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.FOXA1.MCF-7_ARID1A-KO 145 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 61 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 145 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 65 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 145 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 145 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 107 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 139 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 145 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 145 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 145 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 145 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 121 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 145 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 117 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 145 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 119 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 130 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 145 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 107 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 133 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 110 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 117 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 145 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 145 bp overlap
ChIP DE DE-FOXA2-2 145 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 137 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 145 bp overlap
HNRNPK 1 dataset
ChIP HepG2 ENCFF826MXP 91 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 145 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 145 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 145 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 145 bp overlap
POLR2A 6 datasets
ChIP body of pancreas ENCFF501FEC 145 bp overlap
ChIP body of pancreas ENCFF675RCN 145 bp overlap
ChIP body of pancreas ENCFF727UBE 121 bp overlap
ChIP sigmoid colon ENCFF748YVT 145 bp overlap
ChIP sigmoid colon ENCFF754JQR 145 bp overlap
ChIP transverse colon ENCFF840PXT 145 bp overlap
RNF2 2 datasets
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 50 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 80 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 145 bp overlap
SIX1 1 dataset
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
SIX2 4 datasets
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
ChIP HEK GSE73865.SIX2.HEK 145 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 141 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 145 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 115 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 112 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 145 bp overlap
SUZ12 1 dataset
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 145 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 145 bp overlap
ZNF76 1 dataset
Motif DE_12h DE_12h-ZNF76_MA1716.2 17 bp overlap