chr5 : 32,708,947 32,709,353
406 bp 33 TFs 1 linked gene
This 406 bp open chromatin element is linked to NPR3 and is bound by 33 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NPR3 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:32,703,947 – 32,714,353
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 399 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 297 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 281 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 406 bp overlap
BRD4 1 dataset
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 134 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 347 bp overlap
CTCF 7 datasets
ChIP GM04604 GSE148179.CTCF.GM04604 188 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 214 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 213 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 281 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 131 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 307 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 229 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 131 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 180 bp overlap
ESR1 1 dataset
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 242 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 252 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap
GATA1 1 dataset
ChIP K-562 ENCSR000EWM.GATA1.K-562 155 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 406 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 406 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 406 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 247 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 406 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 132 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 160 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 332 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 294 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR633EIC.PBX2.K-562 144 bp overlap
POLR2A 1 dataset
ChIP thyroid gland ENCFF979LRR 406 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 136 bp overlap
POU5F1 1 dataset
ChIP SKM-1 GSE93706.POU5F1.SKM-1 188 bp overlap
RAD21 1 dataset
ChIP HCT-116 GSE131606.RAD21.HCT-116 355 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 230 bp overlap
RNF2 7 datasets
ChIP H1 ENCFF239FFS 406 bp overlap
ChIP H1 ENCFF239FFS 406 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 295 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 272 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 406 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 373 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 333 bp overlap
RUNX1 2 datasets
ChIP ME-1 GSE117138.RUNX1.ME-1 293 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 293 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 287 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 394 bp overlap
SUZ12 2 datasets
ChIP WA01 ENCSR000ATS.SUZ12.WA01 177 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 159 bp overlap
TAL1 1 dataset
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 185 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 185 bp overlap