chr5 : 9,608,184 9,608,494
310 bp 20 TFs 0 linked genes
This 310 bp open chromatin element has no linked target genes and is bound by 20 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:9,603,184 – 9,613,494
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 207 bp overlap
BNC2 1 dataset
ChIP SK-N-SH ENCFF174EMC 295 bp overlap
BRD4 1 dataset
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 157 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 310 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 232 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 310 bp overlap
GATA2 1 dataset
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 165 bp overlap
GATA3 4 datasets
ChIP Kelly GSE94822.GATA3.Kelly 169 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 161 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 229 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 153 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 310 bp overlap
ChIP DE DE-GATA4-2 310 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 310 bp overlap
ChIP DE DE-GATA6-2 310 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 310 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 310 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 310 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 310 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 310 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 310 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 310 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 216 bp overlap
ChIP SK-N-SH ENCFF285GEQ 181 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 253 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 120 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 67 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 284 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 310 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 310 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 306 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 257 bp overlap
SMARCA4 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 310 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 310 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 294 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 294 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 201 bp overlap