chr5 : 8,685,785 8,686,201
416 bp 21 TFs 1 linked gene
This 416 bp open chromatin element is linked to ENSG00000279125 and is bound by 21 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000279125 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:8,680,785 – 8,691,201
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP GSE80256.AR.LNCaP 274 bp overlap
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 173 bp overlap
BRD4 1 dataset
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 216 bp overlap
CTCF 138 datasets
ChIP 22Rv1 ENCFF466OXN 416 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 289 bp overlap
ChIP 81-3 ERP002246.CTCF.81-3 160 bp overlap
ChIP C4-2B ENCFF821XVN 416 bp overlap
ChIP DND-41 ENCFF913MRA 175 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 276 bp overlap
ChIP GM23338 ENCFF531QOI 339 bp overlap
ChIP GM23338 ENCFF772DML 153 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 286 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H9 ENCFF152GTF 240 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 221 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 123 bp overlap
ChIP HSPC-CD34 GSE107147.CTCF.HSPC-CD34 129 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 196 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 189 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 154 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 185 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 176 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 96 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 251 bp overlap
ChIP IMR-5 GSE78957.CTCF.IMR-5 113 bp overlap
ChIP IMR-90 ENCFF887MRH 222 bp overlap
ChIP IMR-90 GSE43070.CTCF.IMR-90 124 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 97 bp overlap
ChIP Kasumi-1_siRE GSE121280.CTCF.Kasumi-1_siRE 133 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 164 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 113 bp overlap
ChIP LNCAP ENCFF700QXT 384 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 268 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 117 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 145 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 238 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 179 bp overlap
ChIP MCF-7 ENCFF162GNE 219 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 228 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 213 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 128 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 115 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 104 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 129 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 200 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 232 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 286 bp overlap
ChIP NCI-H929 ENCFF305JAB 408 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 214 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 142 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 310 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 224 bp overlap
ChIP PC-3 ENCFF487TUI 288 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 352 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 224 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 182 bp overlap
ChIP RWPE2 ENCFF911IEE 360 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 187 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 144 bp overlap
ChIP SK-N-SH ENCFF731NJX 237 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 217 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 257 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 151 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 142 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 184 bp overlap
ChIP VCaP ENCFF858YQT 416 bp overlap
ChIP VCaP ENCFF858YQT 375 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 370 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 167 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 163 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 148 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 139 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 162 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 179 bp overlap
ChIP ascending aorta ENCFF451CCT 336 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 293 bp overlap
ChIP brain ENCFF163BBN 388 bp overlap
ChIP brain ENCFF685VRG 416 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 297 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 206 bp overlap
ChIP chondrocyte ENCFF134ORZ 238 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 273 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 115 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 185 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 215 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 192 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 153 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 368 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 353 bp overlap
ChIP endodermal cell ENCFF471YCZ 293 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 295 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 158 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 323 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 201 bp overlap
ChIP fibroblast of dermis ENCFF986DNJ 288 bp overlap
ChIP fibroblast_DERMAL ENCSR000APM.CTCF.fibroblast_DERMAL 152 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 147 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 157 bp overlap
ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 310 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 151 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 225 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 158 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 369 bp overlap
ChIP hepatocyte ENCFF263BLJ 285 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 245 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 148 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 225 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 174 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 123 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 159 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 206 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 184 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
ChIP islet ERP004003.CTCF.islet 264 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 283 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 194 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 236 bp overlap
ChIP nephron ENCFF589HXU 387 bp overlap
ChIP neural crest cell ENCFF182LWK 389 bp overlap
ChIP neural progenitor cell ENCFF420RBO 344 bp overlap
ChIP neural progenitor cell ENCFF581WPG 416 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 261 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 217 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 195 bp overlap
ChIP pancreas ENCSR000DND.CTCF.pancreas 126 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 353 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 219 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 110 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 260 bp overlap
ChIP thoracic-aorta ENCSR549TXG.CTCF.thoracic-aorta 219 bp overlap
ChIP thyroid-gland ENCSR955BIB.CTCF.thyroid-gland 174 bp overlap
ChIP tibial-artery ENCSR079YAP.CTCF.tibial-artery 157 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 336 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 347 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 159 bp overlap
ESR1 7 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 152 bp overlap
ChIP MCF-7 GSE68356.ESR1.MCF-7 195 bp overlap
ChIP MCF-7_E2 ERP000901.ESR1.MCF-7_E2 126 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 182 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 185 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 179 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 163 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 147 bp overlap
JMJD6 1 dataset
ChIP HeLa GSE51633.JMJD6.HeLa 151 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 363 bp overlap
KDM5B 2 datasets
ChIP HCC2157 GSE46055.KDM5B.HCC2157 127 bp overlap
ChIP T-47D GSE46055.KDM5B.T-47D 103 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 182 bp overlap
NCOA1 1 dataset
ChIP MCF-7 ERP000901.NCOA1.MCF-7 201 bp overlap
NR3C1 1 dataset
ChIP breast_tumor_Male_15 GSE104399.NR3C1.breast_tumor_Male_15 233 bp overlap
RAD21 32 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 117 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 225 bp overlap
ChIP H1 ENCFF698EWO 171 bp overlap
ChIP H1 ENCFF967OJF 136 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.RAD21.HEC-1-B_FFRR-insertion 63 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 106 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 140 bp overlap
ChIP HepG2 ENCFF906QIS 220 bp overlap
ChIP HepG2 ENCFF963UBJ 247 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 198 bp overlap
ChIP MCF-7 ENCFF694KOM 301 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 221 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 186 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 159 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 141 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 241 bp overlap
ChIP SK-N-SH ENCFF747MAS 116 bp overlap
ChIP SK-N-SH GSE76815.RAD21.SK-N-SH 163 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 257 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 354 bp overlap
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 288 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 170 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 231 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 207 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 241 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 218 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 159 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 164 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 197 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 209 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 206 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 215 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 164 bp overlap
SMC3 4 datasets
ChIP GP5D GSE51234.SMC3.GP5D 182 bp overlap
ChIP SK-N-SH ENCFF791WFB 233 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 203 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 303 bp overlap
SNAI2 2 datasets
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 258 bp overlap
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 249 bp overlap
STAG1 5 datasets
ChIP HeLa GSE126990.STAG1.HeLa 214 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 214 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 129 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 183 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 135 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 94 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 185 bp overlap