Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

31 transcription factors

BRD4 3 datasets

ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 195 bp overlap

ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 184 bp overlap

ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 238 bp overlap

ELF3 2 datasets

ChIP PDAC GSE64557.ELF3.PDAC 200 bp overlap

ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 239 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 157 bp overlap

ESR1 7 datasets

ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 227 bp overlap

ChIP MCF-7_E2 GSE59530.ESR1.MCF-7_E2 127 bp overlap

ChIP MCF-7_E2_TNF GSE59530.ESR1.MCF-7_E2_TNF 263 bp overlap

ChIP MCF-7_SHFOXA1_E2_TNF GSE59530.ESR1.MCF-7_SHFOXA1_E2_TNF 189 bp overlap

ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 160 bp overlap

ChIP MCF-7_shYAP1 GSE125594.ESR1.MCF-7_shYAP1 177 bp overlap

ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 162 bp overlap

FOS 1 dataset

ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 101 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 292 bp overlap

GATA1 1 dataset

ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 74 bp overlap

GATA2 2 datasets

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap

GATA3 1 dataset

ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 116 bp overlap

GATA4 6 datasets

ChIP DE DE-GATA4-1 292 bp overlap

ChIP DE DE-GATA4-2 292 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP foregut GSE117136.GATA4.foregut 292 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 292 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 249 bp overlap

GATA5 1 dataset

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 292 bp overlap

ChIP DE DE-GATA6-2 292 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 292 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 292 bp overlap

ChIP foregut GSE117136.GATA6.foregut 292 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 292 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 276 bp overlap

GCM2 1 dataset

Motif DE_60h DE_60h-GCM2_MA0767.2 8 bp overlap

Gata3 1 dataset

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

MEIS1 1 dataset

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MXI1 1 dataset

Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap

MYCN 1 dataset

ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 138 bp overlap

NR2C2 1 dataset

Motif DE_60h DE_60h-NR2C2_MA0504.2 14 bp overlap

PHIP 1 dataset

ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 95 bp overlap

PSIP1 1 dataset

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 258 bp overlap

RELA 2 datasets

ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 201 bp overlap

ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 211 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 283 bp overlap

SOX10 1 dataset

Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap

SREBP2 1 dataset

ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 292 bp overlap

THRA 1 dataset

Motif DE_60h DE_60h-THRA_MA1969.2 18 bp overlap

TP63 1 dataset

ChIP BxPC-3 GSE115461.TP63.BxPC-3 155 bp overlap

TRPS1 1 dataset

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

ZBTB6 1 dataset

Motif DE_60h DE_60h-ZBTB6_MA1581.2 9 bp overlap

ZNF320 1 dataset

Motif DE_60h DE_60h-ZNF320_MA1976.2 20 bp overlap

ZNF524 1 dataset

Motif DE_60h DE_60h-ZNF524_MA2096.1 9 bp overlap

ZNF75A 1 dataset

Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap

Genome Browser