chr4 : 92,175,333 92,175,545
212 bp 49 TFs 0 linked genes
This 212 bp open chromatin element has no linked target genes and is bound by 49 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:92,170,333 – 92,180,545
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
CTCF 70 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP GM23338 ENCFF531QOI 206 bp overlap
ChIP GM23338 ENCFF772DML 163 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 190 bp overlap
ChIP H1 ENCFF764RHO 163 bp overlap
ChIP H9 ENCFF152GTF 212 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 209 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 152 bp overlap
ChIP HCT116 ENCFF003KHP 212 bp overlap
ChIP HCT116 ENCFF209YMI 212 bp overlap
ChIP HEK293 ENCFF498RMM 212 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 102 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 104 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 141 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 143 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 212 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 206 bp overlap
ChIP MCF-7 ENCFF139NQI 212 bp overlap
ChIP MCF-7 ENCFF198DQX 212 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 181 bp overlap
ChIP MCF-7 ENCFF494VXA 212 bp overlap
ChIP MCF-7 ENCFF844STM 190 bp overlap
ChIP MCF-7 ENCFF954TUV 196 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 193 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 193 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 212 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 212 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 152 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 212 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 165 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 147 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 212 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 212 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 114 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 212 bp overlap
ChIP body of pancreas ENCFF269EDN 212 bp overlap
ChIP body of pancreas ENCFF798MEO 212 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 98 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 183 bp overlap
ChIP endodermal cell ENCFF471YCZ 212 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 212 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 172 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 144 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 162 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 177 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 192 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 212 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 160 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 133 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 141 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 129 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 141 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 143 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 160 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 137 bp overlap
ChIP keratinocyte ENCFF667ULX 212 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 212 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 108 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 212 bp overlap
ChIP neural progenitor cell ENCFF420RBO 212 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 195 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 137 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 154 bp overlap
ChIP pancreas_body ENCSR307PFP.CTCF.pancreas_body 173 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 212 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 204 bp overlap
ChIP transverse colon ENCFF653EYS 212 bp overlap
ChIP transverse colon ENCFF749DPF 212 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
ELF1 1 dataset
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 95 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
MITF 2 datasets
ChIP 501-mel GSE137522.MITF.501-mel 128 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 80 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
NR5A1 1 dataset
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Prdm5 1 dataset
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
RAD21 10 datasets
ChIP H1 ENCFF698EWO 119 bp overlap
ChIP H1 ENCFF967OJF 206 bp overlap
ChIP HCT116 ENCFF568PEO 212 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 121 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 194 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 203 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 169 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 207 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 212 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 176 bp overlap
RARB 1 dataset
Motif DE_12h DE_12h-RARB_MA1552.2 13 bp overlap
RARG 1 dataset
Motif DE_12h DE_12h-RARG_MA1553.2 13 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA1555.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA1556.1 14 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 105 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 134 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 125 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
TBP 5 datasets
ChIP H1 ENCFF859IIO 212 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 150 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 98 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 70 bp overlap
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 130 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 106 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 58 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 125 bp overlap
USF1 2 datasets
ChIP HCT116 ENCFF330PYP 190 bp overlap
ChIP HCT116 ENCFF330PYP 184 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 161 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 205 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 211 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap