chr4 : 68,342,164 68,342,449
285 bp 17 TFs 1 linked gene
This 285 bp open chromatin element is linked to YTHDC1 and is bound by 17 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
YTHDC1 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:68,337,164 – 68,347,449
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP K-562 GSE140325.BRD2.K-562 107 bp overlap
BRD4 3 datasets
ChIP K-562 GSE140325.BRD4.K-562 105 bp overlap
ChIP K-562_dilution-6-100 GSE140325.BRD4.K-562_dilution-6-100 147 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 200 bp overlap
FOXJ2 2 datasets
ChIP K-562 ENCSR847LBF.FOXJ2.K-562 217 bp overlap
ChIP K562 ENCFF457GZC 285 bp overlap
HDAC1 1 dataset
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 123 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 193 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 164 bp overlap
MED1 1 dataset
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 151 bp overlap
MYC 1 dataset
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 190 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 176 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 205 bp overlap
NFIC 3 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 276 bp overlap
ChIP K562 ENCFF167YID 285 bp overlap
ChIP K562 ENCFF167YID 149 bp overlap
RFX1 8 datasets
ChIP K-562 ENCSR041AXL.RFX1.K-562 285 bp overlap
ChIP K-562 ENCSR968GIB.RFX1.K-562 285 bp overlap
ChIP K562 ENCFF421AVO 285 bp overlap
ChIP K562 ENCFF809XVG 285 bp overlap
ChIP MCF-7 ENCFF782EZS 278 bp overlap
ChIP MCF-7 ENCFF973QAD 169 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 285 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 285 bp overlap
RFX3 1 dataset
ChIP Hep-G2 ENCSR633OVO.RFX3.Hep-G2 187 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 209 bp overlap
SMARCA4 8 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 63 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 129 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 57 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 95 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 66 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 112 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 216 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 152 bp overlap
STAT3 2 datasets
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 170 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 124 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 62 bp overlap