chr4 : 66,951,244 – 66,951,872
628 bp 45 TFs 0 linked genes
This 628 bp open chromatin element has no linked target genes and is bound by 45 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:66,946,244 – 66,956,872
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap
DUX4 4 datasets
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 216 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 148 bp overlap
Ebf2 1 dataset
Motif DE_60h DE_60h-Ebf2_MA1604.2 9 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 550 bp overlap
ChIP DE DE-FOXA2-2 524 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 332 bp overlap
FOXH1 2 datasets
Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
GATA1 3 datasets
Motif DE_36h DE_36h-GATA1_MA0035.5 7 bp overlap
Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap
Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 558 bp overlap
ChIP DE DE-GATA4-2 628 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 563 bp overlap
ChIP foregut GSE117136.GATA4.foregut 407 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 477 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 465 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 577 bp overlap
ChIP DE DE-GATA6-2 573 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 455 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 425 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 512 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 466 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 388 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 454 bp overlap
ChIP foregut GSE117136.GATA6.foregut 467 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 526 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 307 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 424 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 251 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 259 bp overlap
Hmga1 1 dataset
Motif DE_60h DE_60h-Hmga1_MA2124.1 8 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 324 bp overlap
MAFF 1 dataset
Motif DE_60h DE_60h-MAFF_MA0495.4 11 bp overlap
Mecom 3 datasets
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
NFIA 2 datasets
Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap
Motif DE_60h DE_60h-NFIA_MA0670.2 6 bp overlap
NFIX 2 datasets
Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap
Motif DE_60h DE_60h-NFIX_MA0671.2 6 bp overlap
NR1H2::RXRA 1 dataset
Motif DE_60h DE_60h-NR1H2RXRA_MA0115.1 17 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 431 bp overlap
PHOX2A 2 datasets
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 3 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 386 bp overlap
Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
POU1F1 2 datasets
Motif DE_36h DE_36h-POU1F1_MA0784.3 14 bp overlap
Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_60h DE_60h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_60h DE_60h-POU2F1SOX2_MA1962.1 17 bp overlap
POU3F1 1 dataset
Motif DE_60h DE_60h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap
POU5F1B 1 dataset
Motif DE_60h DE_60h-POU5F1B_MA0792.1 9 bp overlap
PROP1 2 datasets
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap
Pgr 3 datasets
Motif DE_36h DE_36h-Pgr_MA2323.1 17 bp overlap
Motif DE_60h DE_60h-Pgr_MA2323.1 17 bp overlap
Motif DE_60h DE_60h-Pgr_MA2323.1 17 bp overlap
Pou5f1::Sox2 1 dataset
Motif DE_60h DE_60h-Pou5f1Sox2_MA0142.1 15 bp overlap
Prdm4 1 dataset
Motif DE_60h DE_60h-Prdm4_MA1647.3 11 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 558 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 393 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 333 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 517 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 527 bp overlap
SOX10 1 dataset
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 271 bp overlap
SOX4 1 dataset
Motif DE_60h DE_60h-SOX4_MA0867.3 8 bp overlap
Sox11 1 dataset
Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap
Sox6 1 dataset
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
TCF7L1 1 dataset
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
VENTX 1 dataset
Motif DE_60h DE_60h-VENTX_MA0724.1 9 bp overlap
ZNF354C 2 datasets
Motif DE_36h DE_36h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap
ZNF701 1 dataset
Motif DE_60h DE_60h-ZNF701_MA1987.2 17 bp overlap
Zfp335 1 dataset
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap
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