chr4 : 45,518,938 45,519,131
193 bp 23 TFs 0 linked genes
This 193 bp open chromatin element has no linked target genes and is bound by 23 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:45,513,938 – 45,524,131
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
CTCF 41 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 157 bp overlap
ChIP A549 ENCFF034FVO 193 bp overlap
ChIP C4-2B ENCFF821XVN 193 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP GM23338 ENCFF531QOI 193 bp overlap
ChIP GM23338 ENCFF772DML 113 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 167 bp overlap
ChIP H1 ENCFF764RHO 103 bp overlap
ChIP H9 ENCFF152GTF 193 bp overlap
ChIP HEK293 ENCFF498RMM 193 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 131 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 193 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCFF626XQK 193 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 183 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 193 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 129 bp overlap
ChIP HepG2 ENCFF194VBQ 193 bp overlap
ChIP HepG2 ENCFF348BUL 192 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 100 bp overlap
ChIP LNCAP ENCFF223HIG 193 bp overlap
ChIP LNCAP ENCFF700QXT 193 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 193 bp overlap
ChIP MCF-7 ENCFF414SZG 188 bp overlap
ChIP MCF-7 ENCFF424NQR 185 bp overlap
ChIP MCF-7 ENCFF844STM 184 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 170 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 186 bp overlap
ChIP RWPE2 ENCFF911IEE 193 bp overlap
ChIP RWPE2 ENCFF911IEE 193 bp overlap
ChIP VCaP ENCFF858YQT 193 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 144 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 193 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 120 bp overlap
ChIP endodermal cell ENCFF471YCZ 193 bp overlap
ChIP neural progenitor cell ENCFF420RBO 193 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 99 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 193 bp overlap
CTCFL 1 dataset
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 133 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF13 1 dataset
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
PLAG1 1 dataset
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 193 bp overlap
ChIP H1 ENCFF967OJF 193 bp overlap
ChIP Ishikawa ENCFF570JVV 191 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
VEZF1 1 dataset
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF524 1 dataset
Motif DE_12h DE_12h-ZNF524_MA2096.1 9 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap