chr4 : 37,463,590 – 37,463,758
168 bp 23 TFs 1 linked gene
This 168 bp open chromatin element is linked to C4orf19 and is bound by 23 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
C4orf19 9.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:37,458,590 – 37,468,758
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP HT29 GSE73319.BRD4.HT29 168 bp overlap
CREB1 2 datasets
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 168 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 116 bp overlap
CTCF 68 datasets
ChIP 22Rv1 ENCFF466OXN 168 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 168 bp overlap
ChIP GM23338 ENCFF772DML 168 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 168 bp overlap
ChIP GP5D_SIRAD21 GSE51234.CTCF.GP5D_SIRAD21 168 bp overlap
ChIP H1 ENCFF414GZI 168 bp overlap
ChIP H1 ENCFF764RHO 168 bp overlap
ChIP H9 ENCFF152GTF 168 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 118 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 73 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 168 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 168 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 168 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 119 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 168 bp overlap
ChIP MCF-7 ENCFF139NQI 168 bp overlap
ChIP MCF-7 ENCFF162GNE 168 bp overlap
ChIP MCF-7 ENCFF198DQX 168 bp overlap
ChIP MCF-7 ENCFF210JUZ 168 bp overlap
ChIP MCF-7 ENCFF414SZG 168 bp overlap
ChIP MCF-7 ENCFF494VXA 168 bp overlap
ChIP MCF-7 ENCFF954TUV 168 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 168 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 168 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 162 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 159 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 152 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 119 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 119 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 168 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 168 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 168 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 168 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 168 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 168 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 158 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 116 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 168 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 168 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 168 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 168 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 142 bp overlap
ChIP VCaP ENCFF858YQT 168 bp overlap
ChIP VCaP ENCFF858YQT 168 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 168 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 165 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 132 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 93 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 168 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 168 bp overlap
ChIP colon_transverse ENCSR769WKR.CTCF.colon_transverse 168 bp overlap
ChIP endodermal cell ENCFF471YCZ 168 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 168 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 168 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 131 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 168 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 149 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 163 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 131 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 168 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 153 bp overlap
ChIP neural progenitor cell ENCFF420RBO 168 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 168 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 104 bp overlap
ChIP pancreas ENCSR000DND.CTCF.pancreas 168 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 168 bp overlap
ChIP transverse colon ENCFF471AZS 168 bp overlap
ChIP transverse colon ENCFF471AZS 139 bp overlap
ESR1 14 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 168 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 168 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 168 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 168 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 168 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 168 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 168 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 168 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 168 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 168 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 110 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 140 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 168 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 168 bp overlap
FOXA1 4 datasets
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 168 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 168 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 109 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 99 bp overlap
GATA3 2 datasets
ChIP T-47D ENCSR000BMX.GATA3.T-47D 153 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 147 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 98 bp overlap
GATA6 2 datasets
ChIP OACP4-C GSE132680.GATA6.OACP4-C 161 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 129 bp overlap
HOXB13 3 datasets
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 55 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 114 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 155 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 141 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 87 bp overlap
POLR2A 2 datasets
ChIP stomach ENCFF607ZPU 168 bp overlap
ChIP transverse colon ENCFF607LKE 168 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 140 bp overlap
RAD21 10 datasets
ChIP H1 ENCFF698EWO 168 bp overlap
ChIP H1 ENCFF967OJF 168 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 101 bp overlap
ChIP MCF-7 ENCFF694KOM 168 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 145 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 168 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 146 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 140 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-060m-Flavo-000m 168 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 156 bp overlap
RELA 1 dataset
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 62 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE36578.SMAD3.BG03 106 bp overlap
ChIP HCC1954 GSE104760.SMAD3.HCC1954 168 bp overlap
SMARCA4 3 datasets
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 168 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 168 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 154 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 56 bp overlap
SMARCD3 1 dataset
ChIP MCF-7 GSE124225.SMARCD3.MCF-7 141 bp overlap
SMC1A 2 datasets
ChIP MCF-7 GSE76893.SMC1A.MCF-7 93 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 54 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 168 bp overlap
STAG1 3 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 147 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 153 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 95 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 55 bp overlap
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