chr4 : 29,856,352 – 29,856,822

470 bp 48 TFs 0 linked genes

This 470 bp open chromatin element has no linked target genes and is bound by 48 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

48 transcription factors

BHLHE22 1 dataset

Motif DE_48h DE_48h-BHLHE22_MA1635.2 6 bp overlap

CDK9 1 dataset

ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 193 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 273 bp overlap

ERF::FOXI1 1 dataset

Motif DE_48h DE_48h-ERFFOXI1_MA1935.2 10 bp overlap

ERF::FOXO1 1 dataset

Motif DE_48h DE_48h-ERFFOXO1_MA1936.2 12 bp overlap

ETS1 1 dataset

ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 240 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_48h DE_48h-ETV2FOXI1_MA1942.2 11 bp overlap

ETV5::FOXI1 1 dataset

Motif DE_48h DE_48h-ETV5FOXI1_MA1946.2 12 bp overlap

ETV5::FOXO1 1 dataset

Motif DE_48h DE_48h-ETV5FOXO1_MA1947.2 10 bp overlap

FLI1::FOXI1 1 dataset

Motif DE_48h DE_48h-FLI1FOXI1_MA1950.2 11 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 470 bp overlap

ChIP DE DE-FOXA2-2 470 bp overlap

FOXJ2::ELF1 1 dataset

Motif DE_48h DE_48h-FOXJ2ELF1_MA1952.2 11 bp overlap

FOXO1::ELF1 1 dataset

Motif DE_48h DE_48h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_48h DE_48h-FOXO1ELK1_MA1954.2 13 bp overlap

FOXO1::ELK3 1 dataset

Motif DE_48h DE_48h-FOXO1ELK3_MA1955.2 13 bp overlap

FOXO1::FLI1 1 dataset

Motif DE_48h DE_48h-FOXO1FLI1_MA1956.2 13 bp overlap

GATA1::TAL1 1 dataset

Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap

GATA4 7 datasets

ChIP DE DE-GATA4-1 470 bp overlap

ChIP DE DE-GATA4-2 470 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 379 bp overlap

ChIP foregut GSE117136.GATA4.foregut 419 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 356 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 412 bp overlap

GATA5 1 dataset

Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap

GATA6 12 datasets

ChIP DE DE-GATA6-1 470 bp overlap

ChIP DE DE-GATA6-2 470 bp overlap

Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 470 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 470 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 400 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 470 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 470 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 432 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 449 bp overlap

ChIP foregut GSE117136.GATA6.foregut 394 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 401 bp overlap

GRHL2 1 dataset

Motif DE_48h DE_48h-GRHL2_MA1105.3 8 bp overlap

Gata3 1 dataset

Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap

HSF1 1 dataset

Motif DE_48h DE_48h-HSF1_MA0486.2 13 bp overlap

HSF4 1 dataset

Motif DE_48h DE_48h-HSF4_MA0771.1 13 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 243 bp overlap

MEIS1 1 dataset

ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 255 bp overlap

NIPBL 1 dataset

ChIP LCL GSE38395.NIPBL.LCL 109 bp overlap

Neurod2 1 dataset

Motif DE_48h DE_48h-Neurod2_MA1993.2 6 bp overlap

Olig2 1 dataset

Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 415 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 339 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 279 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 274 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 353 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 341 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 298 bp overlap

SMARCA4 2 datasets

ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 223 bp overlap

ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 162 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 221 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 299 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 415 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 272 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 342 bp overlap

SPDEF 1 dataset

Motif DE_48h DE_48h-SPDEF_MA0686.2 10 bp overlap

SPIC 1 dataset

Motif DE_48h DE_48h-SPIC_MA0687.2 13 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 227 bp overlap

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 80 bp overlap

TAL1 1 dataset

ChIP CHRF28811 ERP008568.TAL1.CHRF28811 312 bp overlap

TRPS1 1 dataset

Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap

Tcf12 1 dataset

Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap

ZBTB40 3 datasets

ChIP HepG2 ENCFF162FPR 195 bp overlap

ChIP MCF-7 ENCFF044DWL 208 bp overlap

ChIP MCF-7 ENCSR318LVG.ZBTB40.MCF-7 124 bp overlap

ZNF382 2 datasets

Motif DE_48h DE_48h-ZNF382_MA1594.1 24 bp overlap

Motif DE_60h DE_60h-ZNF382_MA1594.1 24 bp overlap

ZNF582 1 dataset

Motif DE_48h DE_48h-ZNF582_MA1983.2 19 bp overlap

Zfp335 1 dataset

Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap

Znf423 1 dataset

Motif DE_48h DE_48h-Znf423_MA0116.1 15 bp overlap