chr3 : 159,069,123 159,069,396
273 bp 17 TFs 1 linked gene
This 273 bp open chromatin element is linked to IQCJ and is bound by 17 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
IQCJ at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:159,064,123 – 159,074,396
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
AR 2 datasets
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 147 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 167 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 273 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 222 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 194 bp overlap
NCOA1 1 dataset
ChIP MCF-7 ERP000901.NCOA1.MCF-7 93 bp overlap
NR3C1 2 datasets
ChIP U2OS_GLUCC ERP007081.NR3C1.U2OS_GLUCC 70 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 103 bp overlap
PGR 3 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 131 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 159 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 150 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 245 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 155 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 186 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 257 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 273 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 230 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 164 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 110 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 273 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 179 bp overlap
ZIM3 2 datasets
ChIP HEK293 GSE76494.ZIM3.HEK293 240 bp overlap
ChIP HEK293T GSE78099.ZIM3.HEK293T 88 bp overlap