Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

33 transcription factors

AHR 1 dataset

ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 248 bp overlap

AR 4 datasets

ChIP MDA-MB-453 ERP001226.AR.MDA-MB-453 191 bp overlap

ChIP MDA-MB-453_DHT GSE74069.AR.MDA-MB-453_DHT 191 bp overlap

ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 293 bp overlap

ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 279 bp overlap

ARID1A 1 dataset

ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 430 bp overlap

BHLHE22 1 dataset

Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 464 bp overlap

ERF::SREBF2 1 dataset

Motif DE_60h DE_60h-ERFSREBF2_MA1939.2 16 bp overlap

ERG 1 dataset

ChIP Jurkat GSE49091.ERG.Jurkat 153 bp overlap

ESR1 14 datasets

ChIP MCF-7 GSE68355.ESR1.MCF-7 278 bp overlap

ChIP MCF-7 GSE95302.ESR1.MCF-7 271 bp overlap

ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 214 bp overlap

ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 334 bp overlap

ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 313 bp overlap

ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 206 bp overlap

ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 171 bp overlap

ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 214 bp overlap

ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 383 bp overlap

ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 340 bp overlap

ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 230 bp overlap

ChIP ZR751 ERP000783.ESR1.ZR751 344 bp overlap

ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 216 bp overlap

ChIP breast_tumor_Male_5 GSE104399.ESR1.breast_tumor_Male_5 177 bp overlap

ESR1_pS118 1 dataset

ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 250 bp overlap

FOXA1 22 datasets

ChIP A1A3_Brg1KD_Dex GSE112491.FOXA1.A1A3_Brg1KD_Dex 175 bp overlap

ChIP A1A3_EtOH GSE112491.FOXA1.A1A3_EtOH 193 bp overlap

ChIP MCF-7 GSE81714.FOXA1.MCF-7 405 bp overlap

ChIP MCF-7 ERP001226.FOXA1.MCF-7 221 bp overlap

ChIP MCF-7 GSE95302.FOXA1.MCF-7 226 bp overlap

ChIP MCF-7_1117 GSE124667.FOXA1.MCF-7_1117 158 bp overlap

ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 104 bp overlap

ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 161 bp overlap

ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 346 bp overlap

ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 305 bp overlap

ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 217 bp overlap

ChIP MCF-7_siFEN1 GSE95302.FOXA1.MCF-7_siFEN1 210 bp overlap

ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 190 bp overlap

ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 154 bp overlap

ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 276 bp overlap

ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 193 bp overlap

ChIP ZR751 GSE72249.FOXA1.ZR751 351 bp overlap

ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 395 bp overlap

ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 386 bp overlap

ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 389 bp overlap

ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 244 bp overlap

ChIP breast-cancer_Herceptin-ICI GSE101407.FOXA1.breast-cancer_Herceptin-ICI 245 bp overlap

FOXA2 4 datasets

ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 260 bp overlap

ChIP DE DE-FOXA2-1 483 bp overlap

ChIP DE DE-FOXA2-2 483 bp overlap

ChIP pancreas_CARN1618 ERP008682.FOXA2.pancreas_CARN1618 218 bp overlap

GATA2 1 dataset

ChIP TF1 GSE73207.GATA2.TF1 195 bp overlap

GATA3 3 datasets

ChIP MCF-7 GSE122847.GATA3.MCF-7 335 bp overlap

ChIP MCF-7 GSE133072.GATA3.MCF-7 314 bp overlap

ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 129 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 483 bp overlap

ChIP DE DE-GATA4-2 483 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 483 bp overlap

ChIP DE DE-GATA6-2 483 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 483 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 369 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 391 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 483 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 438 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 483 bp overlap

HDAC2 1 dataset

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 240 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 425 bp overlap

MAFK 1 dataset

Motif DE_60h DE_60h-MAFK_MA0496.4 10 bp overlap

NR3C1 3 datasets

ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 293 bp overlap

ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 215 bp overlap

ChIP ZR751_DEX GSE72249.NR3C1.ZR751_DEX 296 bp overlap

Neurod2 1 dataset

Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap

Olig2 1 dataset

Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap

PGR 1 dataset

ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 262 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 227 bp overlap

SMARCA4 3 datasets

ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 219 bp overlap

ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 168 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 309 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 398 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 461 bp overlap

SOX8 1 dataset

ChIP RH4 GSE116344.SOX8.RH4 210 bp overlap

SPI1 6 datasets

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 276 bp overlap

ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 225 bp overlap

ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 177 bp overlap

ChIP EM-3 GSE128834.SPI1.EM-3 160 bp overlap

ChIP THP-1 GSE128834.SPI1.THP-1 110 bp overlap

ChIP U-937 GSE128834.SPI1.U-937 211 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 310 bp overlap

TAL1 1 dataset

ChIP MOLT-3 GSE59657.TAL1.MOLT-3 164 bp overlap

TFAP2C 1 dataset

ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 154 bp overlap

Tcf12 1 dataset

Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap

Genome Browser