chr3 : 77,793,895 77,794,436
541 bp 23 TFs 0 linked genes
This 541 bp open chromatin element has no linked target genes and is bound by 23 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:77,788,895 – 77,799,436
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 144 bp overlap
ESR1 1 dataset
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 254 bp overlap
FOXA1 5 datasets
ChIP LS180 GSE140533.FOXA1.LS180 99 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 137 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 199 bp overlap
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 213 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 394 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 356 bp overlap
ChIP DE DE-FOXA2-2 353 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 315 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 159 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 346 bp overlap
ChIP DE DE-GATA4-2 366 bp overlap
ChIP foregut GSE117136.GATA4.foregut 480 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 541 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 325 bp overlap
ChIP DE DE-GATA6-2 459 bp overlap
ChIP foregut GSE117136.GATA6.foregut 437 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 491 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 541 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 522 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 287 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 257 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 453 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 256 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 319 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 110 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 282 bp overlap
PDX1 3 datasets
ChIP hESC GSE58685.PDX1.hESC 142 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 234 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 263 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 176 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 206 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 275 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 121 bp overlap
SMARCA4 2 datasets
ChIP NGP GSE134626.SMARCA4.NGP 299 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 157 bp overlap
STAT3 1 dataset
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 200 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 138 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 197 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 116 bp overlap