chr2 : 200,295,938 – 200,296,365
427 bp 20 TFs 1 linked gene
This 427 bp open chromatin element is linked to SPATS2L and is bound by 20 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SPATS2L 9.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:200,290,938 – 200,301,365
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
AR 10 datasets
ChIP LAPC-4_R1881 GSE148358.AR.LAPC-4_R1881 219 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 177 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 223 bp overlap
ChIP VCaP GSE148358.AR.VCaP 147 bp overlap
ChIP prostate-cancer_1335 GSE118845.AR.prostate-cancer_1335 295 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 288 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 277 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 163 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 233 bp overlap
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 338 bp overlap
CEBPA 2 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 160 bp overlap
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 180 bp overlap
CEBPB 1 dataset
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 133 bp overlap
ESR1 2 datasets
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 267 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 239 bp overlap
FOXA1 57 datasets
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 397 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 224 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 286 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 277 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 334 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 289 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 183 bp overlap
ChIP 22Rv1_TFS_Crispr GSE123618.FOXA1.22Rv1_TFS_Crispr 268 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 305 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 349 bp overlap
ChIP HEK293_i176m_TFS GSE123618.FOXA1.HEK293_i176m_TFS 224 bp overlap
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 318 bp overlap
ChIP HEK293_v5_TFS GSE123618.FOXA1.HEK293_v5_TFS 238 bp overlap
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 358 bp overlap
ChIP LAPC-4_CST_V5 GSE123618.FOXA1.LAPC-4_CST_V5 214 bp overlap
ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 285 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 338 bp overlap
ChIP LNCaP GSE52725.FOXA1.LNCaP 198 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 317 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 156 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 251 bp overlap
ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 236 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 179 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 396 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 214 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 254 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 295 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 141 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 233 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 381 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 198 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 269 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 173 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 155 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 295 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 182 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 284 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 193 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 164 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 198 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 227 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 229 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 338 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 169 bp overlap
ChIP breast-cancer_Herceptin-ICI GSE101407.FOXA1.breast-cancer_Herceptin-ICI 343 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 427 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 239 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 197 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 186 bp overlap
ChIP liver ENCSR324RCI.FOXA1.liver 168 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 340 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 311 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 173 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 233 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 308 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 206 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 264 bp overlap
FOXA2 12 datasets
ChIP BJ1-hTERT GSE90454.FOXA2.BJ1-hTERT 321 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 327 bp overlap
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 335 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 311 bp overlap
ChIP BJ1-hTERT_MimosinePlus GSE90454.FOXA2.BJ1-hTERT_MimosinePlus 227 bp overlap
ChIP BJ1-hTERT_MimosineRelease GSE90454.FOXA2.BJ1-hTERT_MimosineRelease 207 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 174 bp overlap
ChIP DE DE-FOXA2-1 427 bp overlap
ChIP DE DE-FOXA2-2 427 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 331 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 224 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 390 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 400 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 427 bp overlap
ChIP DE DE-GATA4-2 427 bp overlap
ChIP foregut GSE117136.GATA4.foregut 391 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 427 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 427 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 427 bp overlap
ChIP DE DE-GATA6-2 427 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 427 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 183 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 427 bp overlap
ChIP foregut GSE117136.GATA6.foregut 427 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 427 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 400 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 189 bp overlap
HOXB13 3 datasets
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 89 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 147 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 247 bp overlap
NKX3-1 1 dataset
ChIP LNCaP_DHT GSE28264.NKX3-1.LNCaP_DHT 144 bp overlap
NR3C1 1 dataset
ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 223 bp overlap
ONECUT2 1 dataset
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 262 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 309 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 130 bp overlap
STAT3 1 dataset
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 203 bp overlap
STAT5B 1 dataset
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 92 bp overlap
TLE3 1 dataset
ChIP LNCaP GSE94682.TLE3.LNCaP 169 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 188 bp overlap
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