chr2 : 106,537,596 106,538,329
733 bp 47 TFs 2 linked genes
This 733 bp open chromatin element is linked to ENSG00000231505 and ENSG00000232001 and is bound by 47 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
ENSG00000231505 at TSS At TSS Proximity
ENSG00000232001 4.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:106,532,596 – 106,543,329
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
AR 1 dataset
ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 222 bp overlap
ARNT 1 dataset
ChIP A-549 GSE85352.ARNT.A-549 248 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 209 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 141 bp overlap
CRX 1 dataset
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 233 bp overlap
CTCF 2 datasets
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 231 bp overlap
ChIP thyroid gland ENCFF204HWS 123 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 239 bp overlap
FERD3L 1 dataset
Motif DE_60h DE_60h-FERD3L_MA1485.1 14 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 540 bp overlap
ChIP DE DE-FOXA2-2 435 bp overlap
FOXE1 1 dataset
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 296 bp overlap
ChIP DE DE-GATA4-2 343 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 320 bp overlap
ChIP DE DE-GATA6-2 316 bp overlap
KMT2A 1 dataset
ChIP MV4-11 GSE79899.KMT2A.MV4-11 215 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 395 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
NFATC3 1 dataset
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 389 bp overlap
Nfatc1 1 dataset
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
Nfe2l2 1 dataset
Motif DE_60h DE_60h-Nfe2l2_MA0150.3 11 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 257 bp overlap
PAX3 1 dataset
Motif DE_60h DE_60h-PAX3_MA1546.2 14 bp overlap
PAX5 1 dataset
Motif DE_60h DE_60h-PAX5_MA0014.4 8 bp overlap
PAX6 1 dataset
ChIP EndoC-betaH2 GSE87530.PAX6.EndoC-betaH2 321 bp overlap
PDX1 1 dataset
ChIP islet ERP001456.PDX1.islet 368 bp overlap
PKNOX2 1 dataset
Motif DE_60h DE_60h-PKNOX2_MA0783.1 12 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 253 bp overlap
RFX4 1 dataset
Motif DE_60h DE_60h-RFX4_MA0799.3 13 bp overlap
RFX5 1 dataset
Motif DE_60h DE_60h-RFX5_MA0510.3 14 bp overlap
RFX7 1 dataset
Motif DE_60h DE_60h-RFX7_MA1554.2 8 bp overlap
Rfx6 1 dataset
Motif DE_60h DE_60h-Rfx6_MA1724.2 9 bp overlap
SOX10 1 dataset
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SPI1 2 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 285 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 278 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 366 bp overlap
ChIP monocyte GSE129202.SREBP2.monocyte 182 bp overlap
STAT1 3 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 159 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 227 bp overlap
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 246 bp overlap
STAT3 2 datasets
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 237 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 153 bp overlap
TGIF1 1 dataset
Motif DE_60h DE_60h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_60h DE_60h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif DE_60h DE_60h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif DE_60h DE_60h-TGIF2LY_MA1572.1 12 bp overlap
ZIM3 2 datasets
ChIP HEK293 GSE76494.ZIM3.HEK293 233 bp overlap
ChIP HEK293T GSE78099.ZIM3.HEK293T 158 bp overlap
ZNF75A 1 dataset
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_60h DE_60h-ZNF75D_MA1601.2 12 bp overlap
ZSCAN4 1 dataset
Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap
Zfp335 1 dataset
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap