chr2 : 42,035,251 42,035,491
240 bp 21 TFs 1 linked gene
This 240 bp open chromatin element is linked to ENSG00000226398 and is bound by 21 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000226398 9.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:42,030,251 – 42,040,491
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
CUX1 1 dataset
ChIP Hep-G2 ENCSR049KIZ.CUX1.Hep-G2 56 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 209 bp overlap
ESR1 2 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 85 bp overlap
ChIP MCF-7_Tamoxifen GSE115607.ESR1.MCF-7_Tamoxifen 94 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 155 bp overlap
GATA6 4 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 92 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 240 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 240 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 240 bp overlap
HNF4A 3 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 65 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 191 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 112 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 240 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 240 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 240 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 240 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCFF971JKN 183 bp overlap
KLF1 1 dataset
ChIP HEK293 GSE76494.KLF1.HEK293 116 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 234 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 164 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 160 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 108 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 148 bp overlap
RELA 1 dataset
ChIP KB GSE52469.RELA.KB 110 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 240 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 240 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 166 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 98 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 240 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 151 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 187 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 82 bp overlap