chr22 : 34,836,688 – 34,837,824
1,136 bp 39 TFs 3 linked genes
This 1.1 kb open chromatin element is linked to ENSG00000237316, ENSG00000234891, and LINC02885 and is bound by 39 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000237316 112.4 kb Distal Multiome
ENSG00000234891 132.4 kb Distal Multiome
LINC02885 165.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr22:34,831,688 – 34,842,824
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
Ahr::Arnt 1 dataset
Motif DE_72h DE_72h-AhrArnt_MA0006.2 5 bp overlap
Arid3a 3 datasets
Motif DE_48h DE_48h-Arid3a_MA0151.1 6 bp overlap
Motif DE_72h DE_72h-Arid3a_MA0151.1 6 bp overlap
Motif DE_72h DE_72h-Arid3a_MA0151.1 6 bp overlap
BCL6B 1 dataset
Motif DE_72h DE_72h-BCL6B_MA0731.1 17 bp overlap
Crx 1 dataset
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DUX4 2 datasets
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
Dmbx1 1 dataset
Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 786 bp overlap
ChIP DE DE-FOXA2-2 696 bp overlap
FOXB1 2 datasets
Motif DE_48h DE_48h-FOXB1_MA0845.1 11 bp overlap
Motif DE_72h DE_72h-FOXB1_MA0845.1 11 bp overlap
FOXC1 2 datasets
Motif DE_48h DE_48h-FOXC1_MA0032.2 11 bp overlap
Motif DE_72h DE_72h-FOXC1_MA0032.2 11 bp overlap
Foxn1 2 datasets
Motif DE_60h DE_60h-Foxn1_MA1684.1 6 bp overlap
Motif DE_72h DE_72h-Foxn1_MA1684.1 6 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 802 bp overlap
ChIP DE DE-GATA4-2 730 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 671 bp overlap
ChIP DE DE-GATA6-2 848 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 535 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 815 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 853 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 594 bp overlap
GSC 1 dataset
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
HOXB13 2 datasets
Motif DE_48h DE_48h-HOXB13_MA0901.3 9 bp overlap
Motif DE_72h DE_72h-HOXB13_MA0901.3 9 bp overlap
Isl1 2 datasets
Motif DE_48h DE_48h-Isl1_MA1608.2 7 bp overlap
Motif DE_72h DE_72h-Isl1_MA1608.2 7 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 253 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 273 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 328 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 328 bp overlap
KLF17 3 datasets
Motif DE_48h DE_48h-KLF17_MA1514.2 14 bp overlap
Motif DE_60h DE_60h-KLF17_MA1514.2 14 bp overlap
Motif DE_72h DE_72h-KLF17_MA1514.2 14 bp overlap
NFIA 2 datasets
Motif DE_48h DE_48h-NFIA_MA0670.2 6 bp overlap
Motif DE_72h DE_72h-NFIA_MA0670.2 6 bp overlap
NFIX 2 datasets
Motif DE_48h DE_48h-NFIX_MA0671.2 6 bp overlap
Motif DE_72h DE_72h-NFIX_MA0671.2 6 bp overlap
NFYA 3 datasets
Motif DE_48h DE_48h-NFYA_MA0060.4 8 bp overlap
Motif DE_60h DE_60h-NFYA_MA0060.4 8 bp overlap
Motif DE_72h DE_72h-NFYA_MA0060.4 8 bp overlap
NFYC 3 datasets
Motif DE_48h DE_48h-NFYC_MA1644.2 7 bp overlap
Motif DE_60h DE_60h-NFYC_MA1644.2 7 bp overlap
Motif DE_72h DE_72h-NFYC_MA1644.2 7 bp overlap
NKX6-3 2 datasets
Motif DE_48h DE_48h-NKX6-3_MA1530.2 8 bp overlap
Motif DE_72h DE_72h-NKX6-3_MA1530.2 8 bp overlap
OTX1 1 dataset
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PBX1 3 datasets
Motif DE_48h DE_48h-PBX1_MA0070.2 9 bp overlap
Motif DE_60h DE_60h-PBX1_MA0070.2 9 bp overlap
Motif DE_72h DE_72h-PBX1_MA0070.2 9 bp overlap
PITX1 1 dataset
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_72h DE_72h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 321 bp overlap
PRDM9 3 datasets
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
RFX7 3 datasets
Motif DE_48h DE_48h-RFX7_MA1554.2 8 bp overlap
Motif DE_60h DE_60h-RFX7_MA1554.2 8 bp overlap
Motif DE_72h DE_72h-RFX7_MA1554.2 8 bp overlap
RHOXF1 1 dataset
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
Rfx6 3 datasets
Motif DE_48h DE_48h-Rfx6_MA1724.2 9 bp overlap
Motif DE_60h DE_60h-Rfx6_MA1724.2 9 bp overlap
Motif DE_72h DE_72h-Rfx6_MA1724.2 9 bp overlap
SIX2 2 datasets
Motif DE_48h DE_48h-SIX2_MA1119.2 11 bp overlap
Motif DE_72h DE_72h-SIX2_MA1119.2 11 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 506 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 482 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 646 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 763 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 593 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 541 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 665 bp overlap
ZNF282 2 datasets
Motif DE_48h DE_48h-ZNF282_MA1154.2 15 bp overlap
Motif DE_72h DE_72h-ZNF282_MA1154.2 15 bp overlap
ZNF410 2 datasets
Motif DE_48h DE_48h-ZNF410_MA0752.2 16 bp overlap
Motif DE_72h DE_72h-ZNF410_MA0752.2 16 bp overlap
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