chr2 : 19,298,213 – 19,298,905

692 bp 63 TFs 0 linked genes

This 692 bp open chromatin element has no linked target genes and is bound by 63 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

63 transcription factors

BCL6B 1 dataset

ChIP HEK293 ENCSR673SGK.BCL6B.HEK293 258 bp overlap

BRD4 1 dataset

ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 324 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 207 bp overlap

ERF::FOXO1 1 dataset

Motif DE_60h DE_60h-ERFFOXO1_MA1936.2 12 bp overlap

ESR1 6 datasets

ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 120 bp overlap

ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 128 bp overlap

ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 180 bp overlap

ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 55 bp overlap

ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 100 bp overlap

ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 66 bp overlap

ETV5::FOXI1 1 dataset

Motif DE_60h DE_60h-ETV5FOXI1_MA1946.2 12 bp overlap

FIGLA 1 dataset

Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap

FLI1::FOXI1 1 dataset

Motif DE_60h DE_60h-FLI1FOXI1_MA1950.2 11 bp overlap

FOXA1 5 datasets

ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 64 bp overlap

ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 303 bp overlap

ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 72 bp overlap

ChIP breast-cancer_heregulin-ICI GSE101407.FOXA1.breast-cancer_heregulin-ICI 157 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 586 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 520 bp overlap

ChIP DE DE-FOXA2-2 589 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 692 bp overlap

FOXD3 1 dataset

Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap

FOXF2 1 dataset

Motif DE_60h DE_60h-FOXF2_MA0030.2 9 bp overlap

FOXH1 1 dataset

Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap

FOXK1 1 dataset

Motif DE_60h DE_60h-FOXK1_MA0852.3 7 bp overlap

FOXK2 1 dataset

Motif DE_60h DE_60h-FOXK2_MA1103.3 7 bp overlap

FOXL1 1 dataset

Motif DE_60h DE_60h-FOXL1_MA0033.2 7 bp overlap

FOXO1::ELF1 1 dataset

Motif DE_60h DE_60h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_60h DE_60h-FOXO1ELK1_MA1954.2 13 bp overlap

FOXO1::FLI1 1 dataset

Motif DE_60h DE_60h-FOXO1FLI1_MA1956.2 13 bp overlap

FOXO4 1 dataset

Motif DE_60h DE_60h-FOXO4_MA0848.1 7 bp overlap

FOXO6 1 dataset

Motif DE_60h DE_60h-FOXO6_MA0849.1 7 bp overlap

FOXP2 1 dataset

Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap

FOXP3 1 dataset

Motif DE_60h DE_60h-FOXP3_MA0850.1 7 bp overlap

Foxf1 1 dataset

Motif DE_60h DE_60h-Foxf1_MA1606.2 7 bp overlap

Foxo1 1 dataset

Motif DE_60h DE_60h-Foxo1_MA0480.3 7 bp overlap

Foxo3 1 dataset

Motif DE_60h DE_60h-Foxo3_MA0157.4 7 bp overlap

Foxq1 1 dataset

Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-1 496 bp overlap

ChIP DE DE-GATA4-2 692 bp overlap

ChIP foregut GSE117136.GATA4.foregut 482 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 557 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 692 bp overlap

GATA5 1 dataset

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 15 datasets

ChIP DE DE-GATA6-1 416 bp overlap

ChIP DE DE-GATA6-2 692 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 339 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 384 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 551 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 482 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 406 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 427 bp overlap

ChIP foregut GSE117136.GATA6.foregut 456 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 423 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 525 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 568 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 672 bp overlap

Gata3 1 dataset

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

Hoxa13 1 dataset

Motif DE_60h DE_60h-Hoxa13_MA0650.4 8 bp overlap

KDM1A 4 datasets

ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 692 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 390 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 171 bp overlap

ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 249 bp overlap

ONECUT1 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 601 bp overlap

OSR2 1 dataset

Motif DE_60h DE_60h-OSR2_MA1646.2 8 bp overlap

PDX1 5 datasets

ChIP hESC GSE58685.PDX1.hESC 185 bp overlap

ChIP hiPSC GSE125768.PDX1.hiPSC 522 bp overlap

ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 417 bp overlap

ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 113 bp overlap

ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 692 bp overlap

PGR 1 dataset

ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 105 bp overlap

Pparg::Rxra 1 dataset

Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap

Prdm5 1 dataset

Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap

Ptf1A 1 dataset

Motif DE_60h DE_60h-Ptf1A_MA1620.2 8 bp overlap

RARA 1 dataset

ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 283 bp overlap

RUNX1 1 dataset

ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 160 bp overlap

SIX2 2 datasets

ChIP HEK GSE73865.SIX2.HEK 110 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 102 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 505 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 288 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 315 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 160 bp overlap

SMARCA4 2 datasets

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 526 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 281 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 243 bp overlap

SPDEF 1 dataset

ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 425 bp overlap

SPI1 2 datasets

ChIP K-562 ENCSR000BGW.SPI1.K-562 100 bp overlap

ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 109 bp overlap

Stat2 1 dataset

Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap

TRPS1 1 dataset

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

Yy1 1 dataset

Motif DE_60h DE_60h-Yy1_MA0095.4 8 bp overlap

ZBTB7A 1 dataset

ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 274 bp overlap

ZEB1 1 dataset

Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap

ZIM3 1 dataset

Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap

ZNF143 1 dataset

ChIP MCF-7 GSE76454.ZNF143.MCF-7 100 bp overlap

ZNF157 1 dataset

Motif DE_60h DE_60h-ZNF157_MA2331.1 21 bp overlap

ZNF335 1 dataset

ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 313 bp overlap

Zfp335 1 dataset

Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap

Zic1::Zic2 1 dataset

Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap