chr20 : 58,656,803 58,657,048
245 bp 20 TFs 2 linked genes
This 245 bp open chromatin element is linked to STX16-NPEPL1 and STX16 and is bound by 20 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
STX16-NPEPL1 5.4 kb Proximal Proximity
STX16 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:58,651,803 – 58,662,048
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP HepG2 ENCFF207QHL 216 bp overlap
BRD4 1 dataset
ChIP CLB-Ga_Dinaciclib GSE133453.BRD4.CLB-Ga_Dinaciclib 65 bp overlap
ESR1 1 dataset
ChIP MCF-7_800 GSE115607.ESR1.MCF-7_800 191 bp overlap
ETV1 1 dataset
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 97 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 82 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 245 bp overlap
ChIP DE DE-FOXA2-2 245 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 205 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 233 bp overlap
FOXF1 1 dataset
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 122 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 245 bp overlap
ChIP DE DE-GATA4-2 245 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 245 bp overlap
ChIP DE DE-GATA6-2 245 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 127 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 245 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 245 bp overlap
KMT2A 2 datasets
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 245 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 165 bp overlap
MYC 1 dataset
ChIP MCF-7 ENCFF394LGD 171 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 146 bp overlap
RBFOX2 3 datasets
ChIP HepG2 ENCFF554DMZ 245 bp overlap
ChIP HepG2 ENCFF939HTZ 245 bp overlap
ChIP HepG2 ENCFF939HTZ 242 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 203 bp overlap
SS18 1 dataset
ChIP SYO-1 GSE108025.SS18.SYO-1 245 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 127 bp overlap
ZKSCAN5 1 dataset
ChIP HEK293T GSE78099.ZKSCAN5.HEK293T 203 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 245 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 245 bp overlap
ZNF579 1 dataset
ChIP MCF-7 ENCFF550XRS 245 bp overlap