chr20 : 45,854,794 45,855,232
438 bp 28 TFs 2 linked genes
This 438 bp open chromatin element is linked to ACOT8 and ZSWIM3 and is bound by 28 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ACOT8 2.2 kb Proximal Proximity
ZSWIM3 2.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:45,849,794 – 45,860,232
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 109 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 392 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 235 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 182 bp overlap
ESR1 1 dataset
ChIP T-47D GSE148277.ESR1.T-47D 171 bp overlap
ETS1 3 datasets
ChIP cardiomyocyte_D14 GSE129986.ETS1.cardiomyocyte_D14 208 bp overlap
ChIP cardiomyocyte_D5 GSE129986.ETS1.cardiomyocyte_D5 227 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 58 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 211 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000EWG.GATA2.K-562 159 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 374 bp overlap
ChIP DE DE-GATA4-2 381 bp overlap
ChIP foregut GSE117136.GATA4.foregut 336 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 280 bp overlap
ChIP DE DE-GATA6-2 396 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 156 bp overlap
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 154 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 215 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 409 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94782.MYCN.Kelly 106 bp overlap
NANOG 3 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 183 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 306 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 285 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 96 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 261 bp overlap
NFIC 1 dataset
ChIP K562 ENCFF167YID 184 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 106 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 174 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 364 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 224 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 438 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 228 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 183 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 187 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 233 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 308 bp overlap