chr2 : 13,015,961 13,016,434
473 bp 25 TFs 1 linked gene
This 473 bp open chromatin element is linked to ENSG00000225649 and is bound by 25 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000225649 8.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:13,010,961 – 13,021,434
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 360 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 249 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 114 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 284 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 428 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 199 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 102 bp overlap
ESR1 1 dataset
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 62 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 473 bp overlap
ChIP DE DE-FOXA2-2 473 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 473 bp overlap
ChIP DE DE-GATA4-2 473 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 473 bp overlap
ChIP DE DE-GATA6-2 473 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 421 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 86 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 236 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 58 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 86 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 259 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 219 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 421 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 216 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 336 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 256 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 286 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 245 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 245 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 108 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 184 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 193 bp overlap