chr19 : 52,176,705 52,176,878
173 bp 26 TFs 3 linked genes
This 173 bp open chromatin element is linked to ZNF836, ENSG00000267827, and ENSG00000267927 and is bound by 26 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
ZNF836 5.1 kb Proximal Proximity
ENSG00000267827 5.2 kb Proximal Proximity
ENSG00000267927 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:52,171,705 – 52,181,878
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 135 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 161 bp overlap
CEBPB 3 datasets
ChIP H1 ENCFF871PTR 173 bp overlap
ChIP MCF-7 ENCFF772ZTQ 173 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 100 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 173 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 173 bp overlap
ESR1 2 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 161 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 146 bp overlap
GATA3 5 datasets
ChIP MCF-7 ENCFF178GBS 173 bp overlap
ChIP MCF-7 ENCFF352QVM 173 bp overlap
ChIP MCF-7 ENCFF437NQS 173 bp overlap
ChIP MCF-7 ENCSR000EWS.GATA3.MCF-7 173 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 173 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 173 bp overlap
ChIP DE DE-GATA4-2 173 bp overlap
ChIP foregut GSE117136.GATA4.foregut 173 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 173 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 173 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 173 bp overlap
ChIP DE DE-GATA6-2 173 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 173 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 173 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 173 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 173 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 173 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 173 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 173 bp overlap
ChIP foregut GSE117136.GATA6.foregut 173 bp overlap
GRHL2 2 datasets
ChIP HBE GSE46194.GRHL2.HBE 133 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 173 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCFF881POI 173 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCFF329FZB 170 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 173 bp overlap
PKNOX1 4 datasets
ChIP HEK293T ENCFF174WDB 173 bp overlap
ChIP K562 ENCFF236IUS 173 bp overlap
ChIP MCF-7 ENCFF116OCS 173 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 173 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 129 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 173 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 173 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 173 bp overlap
SPDEF 2 datasets
ChIP MCF-7 ENCFF827PZY 173 bp overlap
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 163 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 124 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 173 bp overlap
TCF7L2 1 dataset
ChIP MCF-7 ENCFF219LIX 173 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 164 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 173 bp overlap
YY1AP1 5 datasets
ChIP MCF-7_Veh GSE125594.YY1AP1.MCF-7_Veh 173 bp overlap
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 173 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.YY1AP1.PC-9_1DF_DMSO 171 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 173 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 173 bp overlap
ZNF217 1 dataset
ChIP MCF-7 ENCFF299BWK 173 bp overlap