chr18 : 59,706,589 59,706,930
341 bp 25 TFs 1 linked gene
This 341 bp open chromatin element is linked to CCBE1 and is bound by 25 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CCBE1 9.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:59,701,589 – 59,711,930
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
AR 1 dataset
ChIP breast_tumor_Male_10 GSE104399.AR.breast_tumor_Male_10 245 bp overlap
BRD4 2 datasets
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 300 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 243 bp overlap
CEBPB 1 dataset
ChIP WA01 ENCSR000EBV.CEBPB.WA01 160 bp overlap
CHD4 1 dataset
ChIP keratinocyte_CTR GSE139685.CHD4.keratinocyte_CTR 166 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 311 bp overlap
ChIP BLaER1 ENCFF460KDD 86 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 300 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 299 bp overlap
ESR1 4 datasets
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 240 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 202 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 278 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 205 bp overlap
FOXA1 6 datasets
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 126 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 237 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 282 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 341 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 222 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 123 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 297 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 278 bp overlap
ChIP DE DE-FOXA2-1 341 bp overlap
ChIP DE DE-FOXA2-2 341 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 318 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 341 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 341 bp overlap
ChIP DE DE-GATA4-2 341 bp overlap
ChIP foregut GSE117136.GATA4.foregut 341 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 246 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 282 bp overlap
ChIP DE DE-GATA6-2 341 bp overlap
ChIP foregut GSE117136.GATA6.foregut 341 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 227 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 186 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 277 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 266 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 341 bp overlap
SPDEF 1 dataset
ChIP A-549 GSE86957.SPDEF.A-549 341 bp overlap
SPI1 1 dataset
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 92 bp overlap
SS18 1 dataset
ChIP SYO-1 GSE108025.SS18.SYO-1 341 bp overlap
STAT1 1 dataset
ChIP CD14 GSE43036.STAT1.CD14 112 bp overlap
ZIM3 2 datasets
ChIP HEK293 GSE76494.ZIM3.HEK293 68 bp overlap
ChIP HEK293T GSE78099.ZIM3.HEK293T 132 bp overlap
ZNF281 1 dataset
ChIP HEK293 GSE76494.ZNF281.HEK293 157 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 148 bp overlap