chr18 : 54,124,129 54,124,531
402 bp 28 TFs 0 linked genes
This 402 bp open chromatin element has no linked target genes and is bound by 28 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:54,119,129 – 54,129,531
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 276 bp overlap
CEBPB 2 datasets
ChIP H1 ENCFF871PTR 252 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 177 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
CREB1 1 dataset
ChIP H1 ENCFF955PMP 186 bp overlap
CRX 2 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 56 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 177 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 185 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 180 bp overlap
ETV2 1 dataset
ChIP induced-endothelial-cell_Veh GSE123906.ETV2.induced-endothelial-cell_Veh 214 bp overlap
EZH2 1 dataset
ChIP hESC GSE113817.EZH2.hESC 83 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 267 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 324 bp overlap
ChIP DE DE-FOXA2-2 311 bp overlap
GABPA 2 datasets
ChIP K562 ENCFF139LXS 261 bp overlap
ChIP K562 ENCFF139LXS 402 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 301 bp overlap
ChIP DE DE-GATA4-2 312 bp overlap
ChIP foregut GSE117136.GATA4.foregut 146 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 215 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 286 bp overlap
ChIP DE DE-GATA6-2 311 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 254 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 198 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 75 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF353UJQ 155 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 231 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 202 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 202 bp overlap
NANOG 7 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 238 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 157 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 214 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 402 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 159 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 206 bp overlap
ChIP hESC GSE18292.NANOG.hESC 166 bp overlap
PGR 1 dataset
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 153 bp overlap
RELA 4 datasets
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 219 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 166 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 163 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 159 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 166 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 200 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 398 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 151 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 186 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 133 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 121 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 184 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 319 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 325 bp overlap
SMARCC1 2 datasets
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 304 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 302 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 199 bp overlap
SPDEF 1 dataset
ChIP A-549 GSE86957.SPDEF.A-549 392 bp overlap
STAT3 2 datasets
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 305 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 198 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 154 bp overlap