chr18 : 49,252,346 49,252,812
466 bp 15 TFs 4 linked genes
This 466 bp open chromatin element is linked to 4 target genes and is bound by 15 transcription factors.
Linked Genes
4 genes
Link type
Gene Expression Dist. to TSS Distance Link type
DYM 208.2 kb Distal Multiome
C18orf32 234.7 kb Distal Multiome
RPL17 240.0 kb Distal Multiome
SMAD7 304.0 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:49,247,346 – 49,257,812
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 334 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 446 bp overlap
ChIP DE DE-FOXA2-2 428 bp overlap
GATA3 1 dataset
ChIP T47D-A1-2_EtOH GSE112491.GATA3.T47D-A1-2_EtOH 70 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 466 bp overlap
ChIP DE DE-GATA4-2 466 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 466 bp overlap
ChIP DE DE-GATA6-2 466 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 370 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 338 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 452 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 451 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 263 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 449 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 449 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 446 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 336 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 451 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 339 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 421 bp overlap
SPI1 1 dataset
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 69 bp overlap
ZNF22 1 dataset
ChIP HEK293 GSE76494.ZNF22.HEK293 141 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 328 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 252 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 127 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 147 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 191 bp overlap