chr17 : 21,108,710 21,109,234
524 bp 13 TFs 7 linked genes
This 524 bp open chromatin element is linked to 7 target genes and is bound by 13 transcription factors.
Linked Genes
7 genes
Gene Expression Dist. to TSS Distance Link type
DHRS7B 18.1 kb Distal Multiome
USP22 65.9 kb Distal Multiome
TMEM11 105.3 kb Distal Multiome
NATD1 144.5 kb Distal Multiome
MAP2K3 175.8 kb Distal Multiome
CCDC144NL-AS1 240.4 kb Distal Multiome
CCDC144NL 240.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:21,103,710 – 21,114,234
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 81 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 413 bp overlap
ChIP DE DE-FOXA2-2 308 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 441 bp overlap
ChIP DE DE-GATA4-2 508 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 501 bp overlap
ChIP DE DE-GATA6-2 471 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 524 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 524 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 524 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 402 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 280 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 524 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 490 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 390 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 361 bp overlap
NANOG 4 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 500 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 376 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 332 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 330 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 241 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 252 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 267 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 524 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 524 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 524 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 524 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 524 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 524 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 524 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 524 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 301 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 285 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap