chr17 : 8,875,038 8,875,633
595 bp 15 TFs 5 linked genes
This 595 bp open chromatin element is linked to 5 target genes and is bound by 15 transcription factors.
Linked Genes
5 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
PIK3R6 7.4 kb Proximal Proximity
MFSD6L 75.9 kb Distal Multiome
PIK3R5 90.4 kb Distal Multiome
NTN1 146.2 kb Distal Multiome
MYH10 244.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:8,870,038 – 8,880,633
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 231 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 141 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 115 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 196 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 405 bp overlap
ChIP DE DE-FOXA2-2 383 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 415 bp overlap
ChIP DE DE-GATA4-2 514 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 264 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 433 bp overlap
ChIP DE DE-GATA6-2 482 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 496 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 453 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 468 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 465 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 330 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 273 bp overlap
GRHL2 1 dataset
ChIP WTC11 ENCFF105GQI 325 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 152 bp overlap
POLR2A 2 datasets
ChIP GM12878 ENCFF899QYP 351 bp overlap
ChIP GM12891 ENCFF379FCI 238 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 420 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 449 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 287 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 538 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 452 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 595 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 580 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 396 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 174 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 76 bp overlap