chr1 : 242,522,990 242,523,268
278 bp 16 TFs 1 linked gene
This 278 bp open chromatin element is linked to PLD5 and is bound by 16 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PLD5 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:242,517,990 – 242,528,268
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
BCL11A 1 dataset
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 56 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 192 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 278 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 66 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 156 bp overlap
EZH2 8 datasets
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 278 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 148 bp overlap
ChIP T-REx-293_K27WT_6h GSE118954.EZH2.T-REx-293_K27WT_6h 179 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 171 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 270 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 237 bp overlap
ChIP hepatocyte ENCFF552DZB 278 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 278 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCFF485YIB 278 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 191 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 222 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 108 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 278 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 139 bp overlap
RNF2 2 datasets
ChIP WA01 GSE104690.RNF2.WA01 268 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 278 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 216 bp overlap
SUZ12 4 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 267 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 167 bp overlap
ChIP NT2/D1 ENCFF574SXS 100 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 248 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 69 bp overlap