chr15 : 50,900,796 50,901,063
267 bp 22 TFs 2 linked genes
This 267 bp open chromatin element is linked to ENSG00000273674 and AP4E1 and is bound by 22 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000273674 7.5 kb Proximal Proximity
AP4E1 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:50,895,796 – 50,906,063
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 222 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 267 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 267 bp overlap
CTCF 3 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 164 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 247 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 175 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 230 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 185 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 267 bp overlap
ChIP DE DE-FOXA2-1 267 bp overlap
ChIP DE DE-FOXA2-2 267 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 180 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 177 bp overlap
GATA2 2 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 267 bp overlap
ChIP TSU-1621MT GSE60477.GATA2.TSU-1621MT 144 bp overlap
GATA3 6 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 189 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 186 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 255 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 245 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 257 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 133 bp overlap
GATA4 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 236 bp overlap
ChIP DE DE-GATA4-1 267 bp overlap
ChIP DE DE-GATA4-2 267 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 267 bp overlap
ChIP DE DE-GATA6-2 267 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 267 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 267 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 267 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 267 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 267 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 267 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 267 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 249 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 216 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 267 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 267 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 195 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 179 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 163 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 206 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 267 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 267 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 250 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 205 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 263 bp overlap
TEAD4 3 datasets
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 218 bp overlap
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 156 bp overlap
ChIP MCF-7_Veh GSE125594.TEAD4.MCF-7_Veh 98 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 247 bp overlap